Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01020 ATGGCATCTTCAGCAATGAAGCTTGAGCTTCTCTGGTTCATTCTTATCTTCATTTGGGTTCCATCATCATCATCACAGACACTTGTATTGCCCCTCACACACTCAATCTCCAAAGAGCAATTCAACAGTACCCACAACCTCCTCAAATCCACCTCCACCCGTTCCGCCGTCCGCTTCCACCACCAACGCCAACGTCATCGCCACCACCAAGTTTCCCTTCCTCTCTCCCCCGGAAGCGACTACACCTTGTCCTTCACCCTGGGCTCTGGCCCGGCCCAGGCCCATCCCATAACCCTCTACATGGACACAGGCAGCGACCTTGTCTGGTTCCCCTGTGCCCCCTTCGAGTGCATACTCTGCGAGGGAAAGCCCAGCCCAGGCCCAAGCAGGCCACCAAACATCACACGGGCCCACGCAGTGTCATGCCAGTCCCCTGCATGCTCCGCGGCCCACTCCTCCACGTCATCCTCCGACCTCTGCGCAATGGCACGTTGCCCCTTAGACGCCATAGAAACTTCTGATTGCAGTTCATCGGCGTGTCCGCCATTCTACTACGCTTACGGCGACGGAAGCTTAATCGCAAACCTCTATCGCCACACACTCTCTATGTCTTCTCTCGTTCTCAAGAACTTCACCTTCGGTTGCGCCCACACTACCCTCGGTGAGCCCACCGGCGTCGCTGGTTTCGGCCGTGGTTTGCTCTCTTTTCCGGCCCAGTTAGCCACCTTCTCACCTCAGCTCGGTAATCGATTCTCATACTGTTTGGTATCTCATTCTTTCGACGGCGATCGAATTCGTCGCCCGAGTCCACTCATTCTCGGCCGTCGCGACGGCGGGGACGAACACGGTGAGTTCGTGTACACGTCCCTGCTTCGGAACCCGAAGCACCCGTACTTTTACTCCGTCGGGCTCGCTGGAATCTCAGTCGGGAAGAGGGATATTCCGGCGCCGGAGATACTGAGGAAGGTGGACGCAACAGGGAGTGGTGGTGTTGTAGTTGATTCCGGGACGACGTTCACGATGTTGCCGGCGAGTTTGTATAACTCGGTGGTGGCTGAGTTCGACCGGCGAGTGGGGCGAATTCACAAGCGGGCGAGTGAGGTGGAGGGGAAAACGGGCCTGGGCCCATGTTATTACTTGGACACTGTGGCCCAGGTTCCGGCGGTGACGTTGCGTTTTGCGGGGAATGATTCGAGTGTGGTGCTGCCTAGAAGGAACTACTTCTACGAGTTTTTGTACGGTGAAGATGGAGCCACGACGAAAAGAAGAGTGGGGTGCATGATGCTGATGAACGGTGGTGATGATTCTGAGTTAAGTGGTGGGCCCGGGGCCACGCTTGGGAATTACCAGCAGCAGGGCTTTGAGGTTATTTACGACCTCGAAAAGCAGCGCGTGGGATTCGCCAGAAGGCAGTGCGCGTTGCTTTGGGATAGCCTGAACCGTGAGAAGAACTAG 1455 0.5649 MASSAMKLELLWFILIFIWVPSSSSQTLVLPLTHSISKEQFNSTHNLLKSTSTRSAVRFHHQRQRHRHHQVSLPLSPGSDYTLSFTLGSGPAQAHPITLYMDTGSDLVWFPCAPFECILCEGKPSPGPSRPPNITRAHAVSCQSPACSAAHSSTSSSDLCAMARCPLDAIETSDCSSSACPPFYYAYGDGSLIANLYRHTLSMSSLVLKNFTFGCAHTTLGEPTGVAGFGRGLLSFPAQLATFSPQLGNRFSYCLVSHSFDGDRIRRPSPLILGRRDGGDEHGEFVYTSLLRNPKHPYFYSVGLAGISVGKRDIPAPEILRKVDATGSGGVVVDSGTTFTMLPASLYNSVVAEFDRRVGRIHKRASEVEGKTGLGPCYYLDTVAQVPAVTLRFAGNDSSVVLPRRNYFYEFLYGEDGATTKRRVGCMMLMNGGDDSELSGGPGATLGNYQQQGFEVIYDLEKQRVGFARRQCALLWDSLNREKN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01020 484 PANTHER ASPARTYL PROTEASES 9 481 IPR001461 GO:0004190|GO:0006508
Aip05g01020 484 Gene3D Acid Proteases 277 476 IPR021109 -
Aip05g01020 484 Pfam Xylanase inhibitor C-terminal 300 468 IPR032799 -
Aip05g01020 484 CDD pepsin_A_like_plant 81 472 IPR034161 -
Aip05g01020 484 Gene3D Acid Proteases 58 265 IPR021109 -
Aip05g01020 484 Pfam Xylanase inhibitor N-terminal 81 258 IPR032861 -
Aip05g01020 484 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 331 342 IPR001969 GO:0004190|GO:0006508
Aip05g01020 484 ProSiteProfiles Peptidase family A1 domain profile. 81 468 IPR033121 -
Aip05g01020 484 SUPERFAMILY Acid proteases 76 477 IPR021109 -
Aip05g01020 484 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 9 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01020 Aip-Chr5 14698111 14699946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01020 50 475 Miscellaneous Gene Families AT1G77480 25.991 1.70e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01020 - - adu:107488223 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01020 05 14698111 14699946 Aip05g01020 05 14698111 14699946 ECH