Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01018 ATGAGCAGTGTGAAGGGAAAGGAGAAAGAGAAGGATGTGGAAGTTGTAATAACAACAAGAGGTGACACTGAATCATTAACTACTTATTCTTCTTCTTCTGGTGAGAGAGCGTGGTTGCATTCTGCTGATGGTAGAACTAAATGTCTTCATCCCCCTATTGAAACGCATTGGGAACTCCCTTCATCAGGTGCCAAGAAGCCTTCTTCGTCATCATCAAGCTTCAAGTCACTCTTCACCTTCCCTCTCACCAAACTCAGAAGGACCAAGAGCATGCAAACCGTTCTAGAAGGACCTCGCGATCCAAAAGATGCTCAGATTGTTGAGTCCTTCCGCAGAATGCTCTTTCTTGAGGGTCTCTTACCCACCAAGCACAATGATTATCATACTCTTTTGAGGTTTCTTCGCATGAGAGATTTTGACATGTTGAAATCCAAAGACGTATTTCTCAATTATCTGAAATGGCACGAGGAATTTGGAGTAGACATGCTTCTTAAGGAATTCAAATACCCGGAGTACACAGAAGTAAAGAAATGCTATCCTCATGGATACCATGGGGTTGATAGACATGGCAGACCAGTATACATTGAGAGACTTGGGATGGTAGACCTTAACAAGCTGGTGCAAGTAACCACATTTGAGAGGTTCATAAAGTATCATGTGTCAGAACAAGAGAAAACATTGAGAATAAGATACCCTGCATGTTCAATGGCAGCTAAAAGGCACATAGCATCCACTACAAGTATCTTGGATGTTAATGGAGTAGGAATGTCTAATTTCTCAAAGCCAGCAAGGTACCTCTTTATGGAAATTCAGAAAATCGATAGTAGTTACTATCCTGAGACTCTTCACAAGCTCTTTATTATCAATGCTGGATCCGGCTTCAAAATGCTATGGAAAGCCGTTAAGACATTCCTAGATGTTCGCACAGTAGCAAAAGTTCAAGTGTTAGGTTCTAATTATCTTAGTGTGTTGCTTGAGGCTATTGATATAAGTAATTTGCCAAGTTTTCTGGGTGGTAAATGCACATGTTCTGATTATGGAGGATGCTTAATGAGTGATAGAGGTCCATGGAAAAATCCAGATATAGTAAAAATGATTGAGGTCATATCCTTGAGAGAAGAGACGGATAGTAAAAATGATTCAAATAATGGTGATGTGGCTTCAGAAGATTCTCCCTCGATGCCCAAAAAGGGTGACATGGGAAACCAAAATGACTTTGGTTTTAATCTAGCTCCACTTGCTGAGTCAGCATGTGCTGGATCAGACTCAAAATATAAGTTAGCATTGCAAAAAATTAATGGCCTGGAAGCTGCTCTTGGAGACACCAAGAATAAAATCGAGACACTGGAAGAGGCACTTGAGGACGCCAAGATGGCCTTGAAAGAGTTCGCACAACATATAATACAGCCGAAGCTATGA 1419 0.4094 MSSVKGKEKEKDVEVVITTRGDTESLTTYSSSSGERAWLHSADGRTKCLHPPIETHWELPSSGAKKPSSSSSSFKSLFTFPLTKLRRTKSMQTVLEGPRDPKDAQIVESFRRMLFLEGLLPTKHNDYHTLLRFLRMRDFDMLKSKDVFLNYLKWHEEFGVDMLLKEFKYPEYTEVKKCYPHGYHGVDRHGRPVYIERLGMVDLNKLVQVTTFERFIKYHVSEQEKTLRIRYPACSMAAKRHIASTTSILDVNGVGMSNFSKPARYLFMEIQKIDSSYYPETLHKLFIINAGSGFKMLWKAVKTFLDVRTVAKVQVLGSNYLSVLLEAIDISNLPSFLGGKCTCSDYGGCLMSDRGPWKNPDIVKMIEVISLREETDSKNDSNNGDVASEDSPSMPKKGDMGNQNDFGFNLAPLAESACAGSDSKYKLALQKINGLEAALGDTKNKIETLEEALEDAKMALKEFAQHIIQPKL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01018 472 SMART CRAL_TRIO_N_2 126 151 IPR011074 -
Aip05g01018 472 SMART sec14_4 171 342 IPR001251 -
Aip05g01018 472 Coils Coil 432 466 - -
Aip05g01018 472 Gene3D - 79 158 - -
Aip05g01018 472 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 42 468 - -
Aip05g01018 472 MobiDBLite consensus disorder prediction 374 401 - -
Aip05g01018 472 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 171 345 IPR001251 -
Aip05g01018 472 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH11 42 468 - -
Aip05g01018 472 CDD SEC14 172 340 IPR001251 -
Aip05g01018 472 Pfam CRAL/TRIO domain 179 339 IPR001251 -
Aip05g01018 472 Gene3D - 159 370 IPR036865 -
Aip05g01018 472 SUPERFAMILY CRAL/TRIO domain 170 366 IPR036865 -
Aip05g01018 472 SUPERFAMILY CRAL/TRIO N-terminal domain 97 166 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01018 Aip-Chr5 14668666 14671217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01018 130 336 Acyl Lipid Metabolism Gene Families AT5G47730 28.708 1.39e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01018 - - aip:107643040 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01018 05 14668666 14671217 Aip05g01018 05 14668666 14671217 ECH