Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00993 ATGGATGTAAGGGACCATATTCAAAGTATACTAAGTACTCCAAAGAAATCAAAAACACCAAAGAAAAACAAGACAGATCAAGCTGCTGTTCTAGCAAATGGTCAACAGGGTAGCTCTTCTGCTAGTGGTGGCTTCCATAATAACATGGATCTAGCTTCTCATGTGGAGGTGATTGGTGGGCAAGTTATGGCTATGAAATCCCCACTCTGCAGAGTGGAGGTGGAGCTGCGGCAAGGATACTTAGCCAACCTTGTAGTTCCCTTTAGTAGACATGTAACTGGAGCACTTATTATCCATAACAAGAAAAGCAATAGAATGGAGGCTATCAAACTCACCCTTTGGTCCTCAATCTTCCTCGCCTTCATCCTCTTCTTCTTCATCCTCTCCCCTCCATCTCCTTCCCCCGCCGCCAACCGCCGTGAATCATGGGGAGGCCACCACTGGGAGAAGCGCGTCACCAAGTCAGCCTGCAGGAACTCCGACTCCGGATTCACCGTCCTCGTCACCGGCGCTGCCGGCTTCGTCGGCTGCCACGTGTCCCTTTCCCTCAAGCGGCGCGGCGACGGAGTCGTCGGCCTCGACAACTTCAACCGCTACTACGACCAGAACCTGAAACGCTCCCGCCAGAAGGTGCTCTCAGGCGCCGGCGTCTTCGTGGTGGAGGGCGACATCAACGACGCTGCGCTCATTCGCAAACTCTTCGACGTCGTCCACTTCACCCACGTCATGCACCTGGCCGCCCAGGCTGGCGTCCGCTACGCCATGCAGAACCCGCATTCCTACGTCCATAGCAACGTCGCGGGGTTCGTGAACCTTCTAGAAGCTTCGAAAGATGCGAACCCGCAGCCAGCGATCGTGTGGGCCTCATCGAGTTCCGTGTACGGACTCAATTCTAAGGTACCGTTTTCGGAGAAGGACAGAACTGATCAACCGGCGAGTCTTTACGCCGCTACGAAGAAAGCAGGTGAAGCCATTGCTCATAGCTATAACCACATCTATGGGCTTTCCATCACTGGATTGCGTTTCTTCACTGTTTATGGTCCTTGGGGTAGGCCTGACATGGCGTATTTCTTCTTCACGAAGGATATTCTGAAGGGGAAGCAGATCACTGTGTTTGAGGCGGCAGATGGTGGAACAGTTGCGAGGGATTTTACATACATTGATGACATCGTGAAGGGGTGCTTAGGGGCTTTGGACACGGCGAAGAGGAGCACTGGCAGCGGGGGGAAGAAGAAGGGGCCTGCGCAGTTCAGGATATATAACCTGGGGAACACTTCGCCGGTGGCGGTGAGCGAGCTTGTGAGGATATTGGAGAAGCTTCTGAAGGTGAAGGCGAAGAAGAAGGTGATGGTTATGCCGAGGAATGGGGACGTTCAGTTCACGCATGCCAATATTAGCAGAGCGCATAGGGAGCTAGGTTACATGCCCACCACAGATTTGGAGACAGGTCTCAGCAACTTTGTGAAATGGTACCTTGATTTTTACTCTCCCTCTACGAAGAACCCTGCTTCTTCGTGGTGA 1521 0.5286 MDVRDHIQSILSTPKKSKTPKKNKTDQAAVLANGQQGSSSASGGFHNNMDLASHVEVIGGQVMAMKSPLCRVEVELRQGYLANLVVPFSRHVTGALIIHNKKSNRMEAIKLTLWSSIFLAFILFFFILSPPSPSPAANRRESWGGHHWEKRVTKSACRNSDSGFTVLVTGAAGFVGCHVSLSLKRRGDGVVGLDNFNRYYDQNLKRSRQKVLSGAGVFVVEGDINDAALIRKLFDVVHFTHVMHLAAQAGVRYAMQNPHSYVHSNVAGFVNLLEASKDANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEAIAHSYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKQITVFEAADGGTVARDFTYIDDIVKGCLGALDTAKRSTGSGGKKKGPAQFRIYNLGNTSPVAVSELVRILEKLLKVKAKKKVMVMPRNGDVQFTHANISRAHRELGYMPTTDLETGLSNFVKWYLDFYSPSTKNPASSW 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00993 506 Pfam NAD dependent epimerase/dehydratase family 166 404 IPR001509 -
Aip05g00993 506 PRINTS Nucleotide sugar epimerase signature 417 432 - -
Aip05g00993 506 PRINTS Nucleotide sugar epimerase signature 457 474 - -
Aip05g00993 506 PRINTS Nucleotide sugar epimerase signature 382 397 - -
Aip05g00993 506 PRINTS Nucleotide sugar epimerase signature 192 208 - -
Aip05g00993 506 PANTHER EPIMERASE-RELATED 101 501 - -
Aip05g00993 506 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 162 495 IPR036291 -
Aip05g00993 506 MobiDBLite consensus disorder prediction 1 26 - -
Aip05g00993 506 Gene3D - 165 496 - -
Aip05g00993 506 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 101 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00993 Aip-Chr5 14085418 14088820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00993 110 500 Miscellaneous Gene Families AT4G00110 74.747 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00993 K08679 - gmx:100788035 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00993 05 14085418 14088820 Aip05g00993 05 14085418 14088820 ECH
Aip03g01384 03 14337014 14339334 Aip05g00993 05 14085418 14088820 ECH