Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00979 ATGTGCCTGGCAGACCTGGAATTCGATTACATAAATGCCTATGACTCCTCTTCTCGAATCAACATGGTGGTCTTACCCGAGTTCATTATTCAGGCTCTCCTTACCTCTTTCTACCTTGTTAACTCCCATTGGATATTGACACTTCTGTCTCTTCCTTACCTCTGCTTCAATCTCCATTTATATAGGCAAAGAAAGCATTTAGTTGATGTTACAGAGATATTCAACAATCTGTCCTGGGAAAAGAAGCACCGCCTCCTCAAACTCATCTATCTTGTTTTCTCCCTTTTCCTCTCTCTATTTTGGATGATCTACAACTCACTCGATTGA 327 0.4098 MCLADLEFDYINAYDSSSRINMVVLPEFIIQALLTSFYLVNSHWILTLLSLPYLCFNLHLYRQRKHLVDVTEIFNNLSWEKKHRLLKLIYLVFSLFLSLFWMIYNSLD 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00979 108 PANTHER CORNICHON-RELATED 1 103 - -
Aip05g00979 108 Pfam Cornichon protein 1 100 IPR003377 GO:0016192
Aip05g00979 108 SMART Cornichon_2 1 100 IPR003377 GO:0016192
Aip05g00979 108 PANTHER PROTEIN CORNICHON HOMOLOG 2-RELATED 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00979 Aip-Chr5 13845479 13847022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00979 K20368 - gmx:100780362 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00979 05 13845479 13847022 Aip05g00979 05 13845479 13847022 ECH
Aip01g01559 01 54961764 54964698 Aip05g00979 05 13845479 13847022 PCT