Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00977 ATGGAGTGGCCAGCTTGTACGAACGAATACGAAAAGCTTCTAAGACGGATGAACACATTTAAGGTTGCCATTGACAATGCTGTCTGTCCCACAGCGACTCTGGTCAAGGTTGATAGTGCCAGAAGGCATGGTATACTATTGGATGCAGTGCAAGTGCTCACTGATTTGAACCTTTCAATTAAGAAGGCCTATATTTCCTCCGATGGAAAGTGGTTCATGGATGTTTTCCATGTAACGGATCAACAAGGAAACAAGCTAACAGATGAGAGCGTTATAAAATACATCGAACAGTCATTGGGAAGTATTCACAATGAGAGAACCAATCACTCAAACGGTCTCACTGCTTTGGAATTAACCGGTACAGACCGAGTCGGCCTTCTATCGGAGGTATTTGCAGTGCTAGCTGATCTTCAATGTGATGTTGTTGAGGCTAAAGTTTGGACTCACAATGGACGCATTGCATCCCTAATCTATGTTAAAGACTGTGATTCTGGTTCCACCATTGAGGACTCCCAGAAAATAAATAGGATTGAAGTGAGGTTGAGAAATATTTTGAAGGGAGACAATGACATTAGAAGTGCCAAAACCACTGTTGCTCTGTCTGTCATGCACACGGAAAGAAGGCTGCATCAAATGATGTTTGCCGACCGTGATTATGAGAGAACTCCCATTCTCAAGTTTACTTCTGATTCTCCGTTAGTGACTGTTCAGAATTGGGCCGAAAGGGGTTATTCGGTTGTGAATGTGCAGTGCAAGGATCGAATCAAGTTATTATTCGATCTTGTATGCAACTTGACAGACATGGAATATGTTGTGTTCCATGCAACTATTACCACTAATGGTGACCAAGCCTACCTGGAGTTTTACATAAGACATAAGGATGGCACTCCAATTAGTTCAGAACCAGAGCGGCAACGAGTAATCCAATGCTTAAAGGCTGCAGTTGAGAGAAGGGCATCTGAGGGTGTTCGACTAGAGCTGTGCGCAGAAGATAAACAGGGGCTTCTAGCAGAGGTGATGAGAATTTTCCGAGAGAATGCGCTGAATGTGACAAGGGCAGAGATATCCACCGCAGGAAACATGGCCACAAATGTGTTCTATGTGACGGACGCCATTGGAAACACAGCCGATCCAAAAATAATCGAATCTGTTCGGCAATTAATCGGGTTAAGTAATTTGGAAGTGAAGGAGTTGCCATTGCTATGGCATCAGAAGGAAGAGAGAGAGGATCAAACAGTTGGTGGAGCTGTGTGGCTTTCTATTGGGAGCCTTGTGAGAAGGAATTTGTACAATTTGGGACTAATCAAATCATGTTCTTGA 1320 0.4356 MEWPACTNEYEKLLRRMNTFKVAIDNAVCPTATLVKVDSARRHGILLDAVQVLTDLNLSIKKAYISSDGKWFMDVFHVTDQQGNKLTDESVIKYIEQSLGSIHNERTNHSNGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKINRIEVRLRNILKGDNDIRSAKTTVALSVMHTERRLHQMMFADRDYERTPILKFTSDSPLVTVQNWAERGYSVVNVQCKDRIKLLFDLVCNLTDMEYVVFHATITTNGDQAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCAEDKQGLLAEVMRIFRENALNVTRAEISTAGNMATNVFYVTDAIGNTADPKIIESVRQLIGLSNLEVKELPLLWHQKEEREDQTVGGAVWLSIGSLVRRNLYNLGLIKSCS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00977 439 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
Aip05g00977 439 Pfam ACT domain 116 169 IPR002912 -
Aip05g00977 439 CDD ACT_ACR_2 114 187 - -
Aip05g00977 439 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 437 - -
Aip05g00977 439 SUPERFAMILY ACT-like 29 102 IPR045865 -
Aip05g00977 439 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 437 IPR040217 -
Aip05g00977 439 ProSiteProfiles ACT domain profile. 34 109 IPR002912 -
Aip05g00977 439 CDD ACT_ACR_3 244 318 - -
Aip05g00977 439 Gene3D - 322 394 - -
Aip05g00977 439 Gene3D - 113 189 - -
Aip05g00977 439 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Aip05g00977 439 SUPERFAMILY ACT-like 111 172 IPR045865 -
Aip05g00977 439 SUPERFAMILY ACT-like 320 395 IPR045865 -
Aip05g00977 439 CDD ACT_ACR_1 32 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00977 Aip-Chr5 13747997 13750377 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00977 - - lja:Lj2g3v2002690.1 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00977 05 13747997 13750377 Aip05g00977 05 13747997 13750377 ECH