Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00966 ATGAGAGTGATAGTGCCATTGCAAGGAGTCGTTCAAGGCAAAGGAGGTCTCTTCTGGGGTTCCGTCATCCCCTGCGCCCTCTTCTACTTCTTCCAGCTCTACTTCAAGAACCGCCGCCACCACCACCGTTCTCCTCCTCCTCCGCCGCCGCCACCACCACCACCACCGCATCATTCCCCGGACCCTGAACCACCCGGTTCCGGCAAGCTTCATCCACATCATGTCCAAGTCTTGCCCCGCTCTCTTTCCAGGATCCTTCTATCTCCCAGAAGCCCTGCCGGACCCGCTTACGTGTCAGGCCGCGCCACCTCTGTCGCCAGAATCTCCGCTGACTCTCCTTACTACGTTGGTTTGCGCAAGGCCGCTGAGGATCCCTACCACGAGGTTCATAATCCTCATGGTGTTATTCAGCTTGGTTTGGCACATAACACGCTGTCTCAGGACTTGGTTCACGATTGGATTCACCAGAATGGAACCACTGCAATTTTAGGCAGAGGAATTGCACCTTACCAACCCCTTGATGGATTCATGGAACTCAAACTGGCTGTGGCTGGTTTCATGCCTCAAGTTATGGAAAAGTCAATTTTCTTCAGTCCCTCACAAATGGTACTAACTGCTGGTGCCACCTCTGCCATTGACATTCTTAGCTTCTGCTTAGCAGATCATGGAAATTCATTCCTTGTTCCAACACCTCACAGCCCTAGCTTTGATGGGGATATAAAATGGCGAAGTGACATCGAGATAGTAGCTGTTCCCTGCCGTAGCACTGATAACTTCAATCTAAGTATAACTGCTCTTGACCGGGCCTTTAACCAGGCAAAGAAACGGGGACAAAAAGTTCGAGGAATCATCATAACGAATCCTTCGAATCCTGTTGGAAAATTATTGGACCGGGAAACACTACTTGATATTGTGGACTTTGCTAGAGAGAAGAATATCCACATAGTCTCCAATGAAACATTTGCAGGGTCTGCTTGTGGAAGCAAAGAGTTTGTGAGCATGGTGGAAATCCTGGAAGCCGAAGAACTTGATCGCGACAGAGTTCATATAATATATAGTTTATCAAATGAACTCTCTGTTCCAGATTTTAAGGTTGGTGTCCTCTACTCCTACAATGAGAATGTCCTAGTTGCTGCTAGAAGAATGGCAAAGTTCTCAGCTCTTTCTGCTCCCACTCAGCAATTGCTTATCTCCATTCTTTCAGATACTAGATTTGTACAGAAATTCATTGAGATCAACAGACTGAGGCTTCGAAGAATGTATAACACATTTGTGGCAGAATTGAAGCAGTTAGGAATCGAGTGCACTAGCAGCAGCGGTGGTTTTTACTGTTGGGCCAACATGAGTAAATTACTCCGGTCTTATGGCGAAAAGGGAGAGCTTGAGCTCTGGGACAGATTGTTGAATGTGGCTAAGATCAATGTTACTCCAGGATCATCTTGTCACTGTATTGAACCAGGATGGTTTCGTTTTTGTTTCACTACATTGTCTGAAAAAGATGTTTCTGTAGTCATGGAACGGATTCGGCGAATCTCTGCAGCCACAAAATCAGAGAGTTGA 1560 0.4692 MRVIVPLQGVVQGKGGLFWGSVIPCALFYFFQLYFKNRRHHHRSPPPPPPPPPPPPHHSPDPEPPGSGKLHPHHVQVLPRSLSRILLSPRSPAGPAYVSGRATSVARISADSPYYVGLRKAAEDPYHEVHNPHGVIQLGLAHNTLSQDLVHDWIHQNGTTAILGRGIAPYQPLDGFMELKLAVAGFMPQVMEKSIFFSPSQMVLTAGATSAIDILSFCLADHGNSFLVPTPHSPSFDGDIKWRSDIEIVAVPCRSTDNFNLSITALDRAFNQAKKRGQKVRGIIITNPSNPVGKLLDRETLLDIVDFAREKNIHIVSNETFAGSACGSKEFVSMVEILEAEELDRDRVHIIYSLSNELSVPDFKVGVLYSYNENVLVAARRMAKFSALSAPTQQLLISILSDTRFVQKFIEINRLRLRRMYNTFVAELKQLGIECTSSSGGFYCWANMSKLLRSYGEKGELELWDRLLNVAKINVTPGSSCHCIEPGWFRFCFTTLSEKDVSVVMERIRRISAATKSES 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00966 519 SUPERFAMILY Formin homology 2 domain (FH2 domain) 45 55 - -
Aip05g00966 519 PANTHER AMINOTRANSFERASE ACS12-RELATED 2 513 - -
Aip05g00966 519 MobiDBLite consensus disorder prediction 40 72 - -
Aip05g00966 519 CDD AAT_like 170 510 - -
Aip05g00966 519 Gene3D - 158 402 IPR015421 GO:0003824
Aip05g00966 519 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 138 164 - -
Aip05g00966 519 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 201 221 - -
Aip05g00966 519 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 223 244 - -
Aip05g00966 519 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 277 301 - -
Aip05g00966 519 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 313 336 - -
Aip05g00966 519 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 347 371 - -
Aip05g00966 519 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 379 402 - -
Aip05g00966 519 SUPERFAMILY PLP-dependent transferases 112 511 IPR015424 -
Aip05g00966 519 MobiDBLite consensus disorder prediction 46 66 - -
Aip05g00966 519 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 513 - -
Aip05g00966 519 Pfam Aminotransferase class I and II 136 508 IPR004839 GO:0009058|GO:0030170
Aip05g00966 519 Gene3D Aspartate Aminotransferase, domain 1 124 507 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00966 Aip-Chr5 13520770 13523786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00966 K14270 - gmx:100783490 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00966 05 13520770 13523786 Aip05g00966 05 13520770 13523786 ECH