Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00946 ATGGGTACTCTAACTGCCACAGTTCCTGTGCTCCCTTCCAAGCTTTCCCCTTCTATTTCACCCCATCGGATCTCGATTTTTCCTCACAGGAGGAGATTCAGCAAGAACAACCAAGCTCTTGTGCCAGTTGCAAGGTTGTTCGGGCCAGCGATCTTCGAGGCTTCGAAGCTCAAGGTATTGTTCTTGGGAGTGGAGGAAGATAAACATCCGGGGAACCTTCCAAGGACATATACCCTAACCCACAGCGATGTCACTGCCAAACTCACTCTCGCTATCTCTCAGACCATCAATAATTCCCAGCTGCAGGGGTGGTACAACAAATTGCAAAGGGATGAAGTGGTGGCACAGTGGAAGAAGGTGAAGGGAAAGATGTCCCTCCACGTTCACTGCCACATTAGTGGAGGTCATTTTCTCTTGGATATGTTTGCTAGGCTAAGATACTTCATCTTCTGCAAAGAGCTTCCAGTGGTGTTGAAGGCATTTGTTCACGGGGATGGCAATTTATTCAACAGCTACCCGGAGCTACAAGACGCTTTGGTTTGGGTATATTTCCATTCAAACATTCCGGAGTTCAACAAGGTGCAGTGTTGGGGTCCACTGAAGGAGGCATCCGCACCATCAATTGGGTCCCCTTCCAAGGGGGAGGAGGACCACCACCGTCAAGATGAGGGGGTGGCAATACCACAGCCATGCCAACAAGACTGTGAGTGTTGCTTTCCACCTTTGACGCTCAGCTCAATCCCGTGGCCTCAAGAGGTTCCCAATCTCGGTCACCAATATCAACCTTATGATTATCGTGCTGAGAATGGGACCCAACAATCCCACAACTTGTAA 834 0.4952 MGTLTATVPVLPSKLSPSISPHRISIFPHRRRFSKNNQALVPVARLFGPAIFEASKLKVLFLGVEEDKHPGNLPRTYTLTHSDVTAKLTLAISQTINNSQLQGWYNKLQRDEVVAQWKKVKGKMSLHVHCHISGGHFLLDMFARLRYFIFCKELPVVLKAFVHGDGNLFNSYPELQDALVWVYFHSNIPEFNKVQCWGPLKEASAPSIGSPSKGEEDHHRQDEGVAIPQPCQQDCECCFPPLTLSSIPWPQEVPNLGHQYQPYDYRAENGTQQSHNL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00946 277 Pfam Staygreen protein 52 203 IPR024438 -
Aip05g00946 277 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 7 257 - -
Aip05g00946 277 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC 7 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00946 Aip-Chr5 13182353 13184754 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00946 K22013 - gmx:732541 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00946 05 13182353 13184754 Aip05g00946 05 13182353 13184754 ECH