Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00930 ATGTGCAAGTTATCATCATCTTACACAGCTACAACTATGTGTAAGCGTGAATGCGATGAAGGGCAAGAAGGAAAAACCCCTGACATGCTTACTCATTTGATTCCTAAAACCCCAACAACAACACAAAAGCCCCACAACAACAACACAACCAATCATTTATCAGAAGCAATCAAAGAGGCAAAGTGCATAGCCAAGATATCGTTACCCATGGTCCTAACTGGCCTACTACTTTACTCTCGCTCCGTCATTTCCATGATCTTCCTTGGCCGCCTCGGCGACCTTGCCTTAGCGGGCGGCTCTCTCGCCATTGGATTCGCCAACATCACCGGCTACTCTCTTCTTTCCGGCCTCGCCGTCGGCATGGACCCAATCTGCGGCCAGGCTTTTGGCGCCAAAAGGTACAAGCTCTTGGGCCTCACCATGCAGAGGACAGTGCTTCTCCTCCTCCTCACTTCAACCTTCATTGCCGCTCTTTGGCTTAACATGAAAAAGATTCTCCTCTTTTGTGGCCAGCAACACGACATAGCCACTGAAGCTCAATCCTTCATTCTCTTCTCTCTTCCCGATCTCCTTGCGCAATCGCTGCTCCATCCTCTTAGAATCTATCTCAGAACCCAATCCATAACTCTCCCTCTTACATACACCGCGCTTCTTTCGATTCTTCTCCACGTCCCAATCAACTACCTACTAGTCTCTGTTCTTGACCTTGGAATCAGAGGAATCGCGTTAGGCGCTGTTTGGACGAACTTCAACCTCGTGGCATCTCTGATTATCTACATATGGGTCTCAGGGATTCACACCAAGACATGGAGCGGTGTTTCTTCTGAATGCTTCAAGGGATGGAAGCAACTACTGAGTCTCGCGATTCCGAGCTGCGTCTCTGTGTGCTTGGAATGGTGGTGGTACGAGATTATGATCTTACTCTGCGGCTTGTTAATCAACCCTCAAGCAACCGTTGCGTCAATGGGGGTTTTGATCCAAACAACTGCATTGATATACATTTTCCCATCTTCGTTGAGCTTCGGCGTGTCTACAAGAGTTGGAAACGAACTTGGTGCGGGAAATCCCAAGAGAGCGAAGCTTGCAGCAATTGTGGGACTCTGTTTCAGCTTCTTATTGGGATTCTCCGCATTGGTGTTTGCAATTTCGGTGAGGAACGTGTGGGCTTCGATGTTCACAAAGGATTCACAGATCATTGCTCTAACGTCAATGGTATTGCCGATCATAGGGCTGTGCGAGCTCGGAAACTGTCCTCAAACGACGGTTTGCGGTGTTCTGAGGGGAACGGCAAGACCAAAACTGGGAGCCAACATAAACTTAGGTTGCTTCTACCTTGTGGGAATGCCCATTGCGGTTTGGTTAAGCTTTTATGGTGGTTTTGACTTTAAAGGATTGTGGCTTGGCCTATTGGGTGCTCAGGGTTCATGTATGGTGACTATGATGTTTGTTTTGGTTCTAACCAATTGGGAAGCTCAAGCACTTAGAGCAAAGGATCTTACTTCTTCTGAGGATGTGGCGCAACCAAATTTCCCAGAGGATGATGAACAAGAACATTGCAAATGCTCTCTGATTTCGTCAAAACAATTCTCTGATTCTTTAGTTTGA 1605 0.4735 MCKLSSSYTATTMCKRECDEGQEGKTPDMLTHLIPKTPTTTQKPHNNNTTNHLSEAIKEAKCIAKISLPMVLTGLLLYSRSVISMIFLGRLGDLALAGGSLAIGFANITGYSLLSGLAVGMDPICGQAFGAKRYKLLGLTMQRTVLLLLLTSTFIAALWLNMKKILLFCGQQHDIATEAQSFILFSLPDLLAQSLLHPLRIYLRTQSITLPLTYTALLSILLHVPINYLLVSVLDLGIRGIALGAVWTNFNLVASLIIYIWVSGIHTKTWSGVSSECFKGWKQLLSLAIPSCVSVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAGNPKRAKLAAIVGLCFSFLLGFSALVFAISVRNVWASMFTKDSQIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPIAVWLSFYGGFDFKGLWLGLLGAQGSCMVTMMFVLVLTNWEAQALRAKDLTSSEDVAQPNFPEDDEQEHCKCSLISSKQFSDSLV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00930 534 PANTHER MULTIDRUG RESISTANCE PROTEIN 46 510 - -
Aip05g00930 534 Pfam MatE 69 229 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g00930 534 Pfam MatE 290 453 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g00930 534 TIGRFAM matE: MATE efflux family protein 69 466 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g00930 534 CDD MATE_eukaryotic 59 493 IPR045069 GO:0042910|GO:1990961
Aip05g00930 534 PANTHER PROTEIN DETOXIFICATION 46 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00930 Aip-Chr5 12918591 12920502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00930 K03327 - gmx:100811560 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00930 05 12918591 12920502 Aip05g00930 05 12918591 12920502 ECH