Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00928 ATGGGTATCCTGTTCTCCTCGAGTTACGCGCGAAAAGCACCGCCTTCGAGTCCTACTTTGGCGGATCTACCAGAGAGTTGCGTCGCTTCCATCATTGGATACATGGATCCTCCCCAGATTTGCAAGCTCGCTATGTTGAATCGCACTTTTCGCGCCGCTTCATCTGCTGATTTTGTTTGGGAATCCAAGCTCCCCCCAAACTACCATGTTCTTATCGCTGAAATCTTCGATCAAAGTGTTCAAAACAATCACAGCAAAAGAGCAATCTATGCCAGCCTCTGTCGCCTCAATTCGCTTGACGAAGGCAACAAGAAAGTTTGGTTGGATAGAAGCACGGGTAAGCTATGTATGTGCATATCTTCCAAGGGGCTATCTATAACGGGGGTTGATGATCGAAGATATTGGAATCGTATCCCAACTGAAGAATCTAGATTCCATGCTGTTGCATACCTCCAGCAAACCTGGTGGTTTGAAGTCATTGGGGAAGTTGACTTTCCCTTTCCTGCCGGGACATATAGCCTATTCTTTAGAATCCATTTGGGGCGAGCTGGCAAGAGGTTCGGTCGACGAGTCTGCAACACCGAGCATGTTCATGGGTGGGACAAAAAGCCCGTTCGGTTCCAGCTTTGGACTTCAGATGGGCAGTATGGTTCATCCCAATGTTTCCTGAAAGAACCTGCCAAATGGAGTTTTTATCATGCTGGCGATTTTACAGTTGTCAATGGCAATGTATCAACAAAAATTAAATTCTCTATGACTCAAATTGATTGCACACACACTAAAGGTGGTCTATGTTTAGATTCTGTGCTCATATACCCAAGTGAATTCAGAAAGCGTCTCGGGAATGGACTGTGTTTCAACAATGGTACTCAGGGTAATTTTGTTTACAATGTAGTTTGGGAGAGTGGTTTGATAGGATTATGTTGTCCAGTTGTGGTGGTATTCAGAATCTCCTTCAATGGAGTTGGTCGTGTGTTGCAGATCAAGACCTACATCAAGGGTGTTCTTGTTGCGGATAGGCTTTTCAATTATGATCCGCCAAAAAGATGTTGCTGGATTCTTCTTCAACATGTAATGGCTAAACGTTCTTGTTTAGGGATGGATCAAACGTACTACGAAGTACTATATATAGCAATAGCATTGGCTCTGGGCTCTGGGCTCTGGTTGGCGCCTGGCGGAGTTCTCGGAAAACATTACTATCTACAACTACCATTAGCATTGAAGCCATTTAGGGTTGTCGTCAGTTCGAAGGAGAAGCATAAGTATATCAGAGATAACTAG 1281 0.445 MGILFSSSYARKAPPSSPTLADLPESCVASIIGYMDPPQICKLAMLNRTFRAASSADFVWESKLPPNYHVLIAEIFDQSVQNNHSKRAIYASLCRLNSLDEGNKKVWLDRSTGKLCMCISSKGLSITGVDDRRYWNRIPTEESRFHAVAYLQQTWWFEVIGEVDFPFPAGTYSLFFRIHLGRAGKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYGSSQCFLKEPAKWSFYHAGDFTVVNGNVSTKIKFSMTQIDCTHTKGGLCLDSVLIYPSEFRKRLGNGLCFNNGTQGNFVYNVVWESGLIGLCCPVVVVFRISFNGVGRVLQIKTYIKGVLVADRLFNYDPPKRCCWILLQHVMAKRSCLGMDQTYYEVLYIAIALALGSGLWLAPGGVLGKHYYLQLPLALKPFRVVVSSKEKHKYIRDN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00928 426 PANTHER F-BOX PROTEIN PP2-A15 1 280 - -
Aip05g00928 426 ProSiteProfiles F-box domain profile. 17 63 IPR001810 GO:0005515
Aip05g00928 426 Pfam Phloem protein 2 115 273 IPR025886 -
Aip05g00928 426 PANTHER F-BOX PROTEIN PP2-A12 1 280 - -
Aip05g00928 426 SUPERFAMILY F-box domain 13 95 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00928 Aip-Chr5 12880330 12885015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00928 - - ahf:112749538 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00928 05 12880330 12885015 Aip05g00928 05 12880330 12885015 ECH
Aip05g00928 05 12880330 12885015 Aip02g00706 02 10507738 10509713 ECH