Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00878 ATGGCGGCTGCGACGACGTCGTATCTGTCGCCGACGCAGAAGTACGCTGCAGGAGCCCTCTTCGGGCTTGCCCTTCACCAGGCCCACCTTCACCAGACCCACCCCCTTGGTTTGCATTTCTATTCCGACGACGATCAACCCTCCACCAGCGACTCTGCCGCAGTTTCCGAGGATCCCCACCTTTGGGTCCACCACTCCTCCGGTCTCCTCCACCCCGTTTTCAAGTATCTAGATATTGATTCTGGGGCTTGGTCTGGACTTGAGGAAACTGCTGGCTCTTCTTCTGCTTCGCGTCATGTGGGACCCTTCTTGAGATTATTATCAGCAGATTTTGATGATGATTCTCAAAGGTCAGATCAAGAACTTGCTTTGTCAGAAGCTGTTGATGCAATGGCATGTACCCTGGAAAAAATTCAAGAGTCTTCAGCGTCTAAAAGAGAGAAGATCCGCGAATACGAGCACCAATGTCGTGAAAAGTTTTCAAATTCAGAAGCTCCATCAGAGTCTGAGAAGGAAGATATGCATTTCGAAACTCCGCACATGCCTGAAACACCTTATTTTGATTGTAAAAACCCACCTCAGGGATCTACTATTAGCAAAATTGATGAAAGTCCAATTGAAGAGGTAACAATGCTCAGCTATCAAAGGAAAATAACAGTTCTCTATGAACTGCTCGCTGCTTGCTTGTCAGATTTAGGTGAAGGAAACAAGAAATATACTCGTAGAAGAAGGGGTTATGATGCTCGACAACGTGTGGCTCTTCGCTTGCTCACAACTTGGCTTGATATCCAGTGGAAAAAAATGGAAGCCATTGAGACTATAGTTGCCAGTTCTGCAATGGCTTTAATTAAAGAGCAAGAATCAAATAAAGAGGAATCTCAATCAAAGGAAAGCAAATGGGCTAAATGGAAGCGAGGTGGTATTATAGGTGCAGCTGCAATAACAGGGGGAGCCTTAATGGCTATTACCGGTGGATTAGCTGCCCCAGCAATTGCTGCAGGACTTGGTGCTATGGCTCCAACTTTGGGTACTTTGATCCCTATAATTGGAGCTGGTGGATTTGCTGCAGCTGCTAGTGCTGCTGGAACTGTTGCTGGTTCTGTTGCTGTTGCTGCATCATTTGGAGCTGCTGGAGCTGGACTTACTGGAACCAAAATGGCTAGGAGAGTTGGGAGTGTGGATGGGTTTGAATTTAAAGCTATAGGAGAAACCCATAACCAAGGTAGGCTAGGGGTTGAGATCCTGATCTCTGGATTTGTTTTTGAGGAGGAGGATTTTATAAGGCCATGGGATGGATTAAATGACAACCTGGAGAGGTATGCACTGCAGTGGGAGTCCAAGAATCTAATTGCCGTGAGCACTGCGATTCAGGATTGGCTTACTTCAAGAATTGCGATGGAGCTGATGAAGCAAGGTGCAATGATGACTGTTATGAGTGCACTTTTAACTGCATTGGCTTGGCCAGCTACCTTACTTGCAGCAACTGATTTCATAGACAGCACGTGGACAATCGCTATTGACAGATCAGACAAGGCTGGAAAGTTGCTTGCTGAAGTGTTGTTGGGAGGATTGCAGGGAAATAGGCCTGTGACACTTGTAGGTTACTCACTTGGGGCCAGAGTTATTTACAAATGTCTAGAGTGCTTGGCTGAAACAGAACACAGTGCTGAACTAGTAGAAAGAGTTGTTCTTCTTGGAGCACCCATTCCAATCAAGGATGAGAACTGGGAAGCAGCTAGAGAGATGGTATCAGGAAGATTTGTAAATGCTTATTCAAGGAATGACTGGATGCTTGGAGTTGCTTTCCGTGCCAGTCTGCTTTCTCAAGGATTAGCTGGAATCCAACCAGTTGATATTCCTGGTATCCAAAATGTTGATGTGACAGATCTTATTGACGGTCATTCTTCTTATCTTTGGGCCACACAAAAGATCTTGGACCAACTTGAATTAGATTCCTACTATCCTGTATATAATAGCATTCTGTGTCATTTCTGA 1995 0.4546 MAAATTSYLSPTQKYAAGALFGLALHQAHLHQTHPLGLHFYSDDDQPSTSDSAAVSEDPHLWVHHSSGLLHPVFKYLDIDSGAWSGLEETAGSSSASRHVGPFLRLLSADFDDDSQRSDQELALSEAVDAMACTLEKIQESSASKREKIREYEHQCREKFSNSEAPSESEKEDMHFETPHMPETPYFDCKNPPQGSTISKIDESPIEEVTMLSYQRKITVLYELLAACLSDLGEGNKKYTRRRRGYDARQRVALRLLTTWLDIQWKKMEAIETIVASSAMALIKEQESNKEESQSKESKWAKWKRGGIIGAAAITGGALMAITGGLAAPAIAAGLGAMAPTLGTLIPIIGAGGFAAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRVGSVDGFEFKAIGETHNQGRLGVEILISGFVFEEEDFIRPWDGLNDNLERYALQWESKNLIAVSTAIQDWLTSRIAMELMKQGAMMTVMSALLTALAWPATLLAATDFIDSTWTIAIDRSDKAGKLLAEVLLGGLQGNRPVTLVGYSLGARVIYKCLECLAETEHSAELVERVVLLGAPIPIKDENWEAAREMVSGRFVNAYSRNDWMLGVAFRASLLSQGLAGIQPVDIPGIQNVDVTDLIDGHSSYLWATQKILDQLELDSYYPVYNSILCHF 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00878 664 Pfam Protein of unknown function (DUF726) 302 650 IPR007941 -
Aip05g00878 664 Gene3D alpha/beta hydrolase 459 649 IPR029058 -
Aip05g00878 664 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 5 659 IPR007941 -
Aip05g00878 664 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 5 659 - -
Aip05g00878 664 SUPERFAMILY alpha/beta-Hydrolases 521 600 IPR029058 -
Aip05g00878 664 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00878 Aip-Chr5 12047924 12053460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00878 - - gmx:100782894 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00878 05 12047924 12053460 Aip05g00878 05 12047924 12053460 ECH
Aip05g00878 05 12047924 12053460 Aip01g00735 01 12454453 12463406 PCT