Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00877 ATGGCCGCCGCCGCGGCTTGCAAGCGATTGGCACAATTGGGAACGAGGTCGGGGATTGCTATGCCCATAACACAATTTTCGAGCTTTGGGGCTTCAAAGTCGTTCTCTTCCAACTCAAGTCTCAGATCATTTTCCCAATTGGTGAAATCAAATGGACAGCGGTTATTCCTCGTTGATACATTAGCCCTTGTTAGGAAACTTGAGGGGCAAGGATTGCCCACAAAGCAGGCTGAGGCGATAACTGCTGCCATAACTGAAGTTTTGAATGACAGTCTAGAAAATGTAGCAGAATCATTAGCAGAGATGCAAAGGGTGAAACCCATGTTTATATTGTTCTTTATTTGGCTCCTTTGTGAAGGACATCATTACTCCTTGCTGCAACAAGAGACTGAAAAACTAAGGAATGATATAGAGAAGATGCGCAGTGAATTGAGGTATGAGATAGATAAAGTCACAGCTGGGCAACGATTGGATTTGAATCTTGAAAGGGGGAGAATAAGGGAGGAATTGTCTAATCAGAATGCCGAAACTAACAATCTGGCTAACAAACTTGATAGAGAGGTTCATGCTCTAAAGGCACAGTTAGAAGCAGCAAAATATGATGTTATAAAATATTGCATAGGAACTCTTGTCTCAATATCTGCTGTTGGACTTGCTGTTCTCCGCATCTTGATGTAA 678 0.4248 MAAAAACKRLAQLGTRSGIAMPITQFSSFGASKSFSSNSSLRSFSQLVKSNGQRLFLVDTLALVRKLEGQGLPTKQAEAITAAITEVLNDSLENVAESLAEMQRVKPMFILFFIWLLCEGHHYSLLQQETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIREELSNQNAETNNLANKLDREVHALKAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00877 225 Pfam Coiled-coil domain-containing protein 90-like 58 224 IPR024461 -
Aip05g00877 225 PANTHER FMP32-LIKE PROTEIN 25 225 - -
Aip05g00877 225 Coils Coil 167 201 - -
Aip05g00877 225 PANTHER UNCHARACTERIZED 25 225 IPR024461 -
Aip05g00877 225 Gene3D - 59 151 - -
Aip05g00877 225 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00877 Aip-Chr5 12041227 12043159 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00877 - - qsu:112033602 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00877 05 12041227 12043159 Aip05g00877 05 12041227 12043159 ECH