Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00851 ATGGCATTATACACAAAAAACGTTTCTTCTTATTTCACAGGCATTCCATCAGCATCATCATGGTTCGAGCTATATGCTGCCTTCTCCACCTTCATGATGCTTCTCAGAACAGCAATCAACGACATGCTTCCTCGTCAACTTCGTAACTTGATCACCACAAAGCTCGAATCTTTCTTCGCCAAGTTCCAGTCCGGCAACCAAGTCTCCCTCAAGATCGACCGCAGTTGGGACAGAACCTCCGGCAAGAACCGCAACGAACTCTACCATGCCGCACACGAATACCTTCCTTCAAGGATCAACAGAACCTACAAGACACTCAAAGTTGGCAAGCTTGAAGACTGCAAGAACCTCGTGCTTGCCGTTGATGGAAACCATGAAGTTGTGGATGAATTTGAAGGAAGCAAGTTCACGTGGATGCTCGATGAGAAAACCGAGAAGGATTCCTCCAAGCCCAAGTACACATTCATATTGAGCTTCCATGAGAAGCAGAGAGAGAAAGCCATGGAGAGGTACATACCTCATGTGCTGAGAACCTACGAGGCCATGAAAGCGGAGCAGAAGATTGTTAAAATCTACTCCAGGTCTTGTGATTACTGGGAACAGAGTGAGTTAACTCACCCTGCTACTTTTGACACGCTTGCCTTGGATCCTGAGTTGAAGAAATCCATCATTGATGACTTGGATCGGTTCTTGAGGAGGAAGGAGCTGTACAAGAGAGTCGGGAAGCCATGGAAACGGGGATACCTCTTGTACGGACCTCCAGGAACTGGGAAATCTAGCTTGGTTGCGGCCATTGCTAACTACTTGAAGTTCGATGTGTATGATTTGGAGCTTAACTCTGTTTTCTCCAACTCGGATCTCATGAGAGCAATTAGGAACACATCAAACCGTTCCATTATTGTGATTGAAGACATTGATTGTAACAAAGAGGTGCAGCCTCGATCAGCAACGGAAGGCCTTTCAAATCCCCAAGATTCAGAGTGTGACAAGGACGGGTTCGGGAAGGGAAAGGGGTTTACACTCTCTGGTTTGCTGAACTACATGGATGGGTTGTGGTCAAGCTGTGGAGAAGAGAGGATCATGGTGTTCACCACAAACCACAAAGAGAGGATTGATGGGGCGTTGCTGAGGCCGGGTCGCATGGACATGCACATCAACTTGTCATTTCTTAAGGGTAAAGGCTTCAGAGTCTTGGCTTCCAATTATCTTGGACTTGATGGCCATCACCCTCTCTTTCAGCAGATCGATGACTTGTTGGAAAAAACAGAGGTCACCCCTGCAGTTGTGGCTGAGCACCTTATGAGATACGAGGACCCTCATCATTCTTTGGAAGCAATTGTCAAATTCCTCACACAGATGGACGCGCAGAATCAAGTGGAGTTGCAATTCACTTCTACTACTACTACTACACAATCAACTTAG 1422 0.4662 MALYTKNVSSYFTGIPSASSWFELYAAFSTFMMLLRTAINDMLPRQLRNLITTKLESFFAKFQSGNQVSLKIDRSWDRTSGKNRNELYHAAHEYLPSRINRTYKTLKVGKLEDCKNLVLAVDGNHEVVDEFEGSKFTWMLDEKTEKDSSKPKYTFILSFHEKQREKAMERYIPHVLRTYEAMKAEQKIVKIYSRSCDYWEQSELTHPATFDTLALDPELKKSIIDDLDRFLRRKELYKRVGKPWKRGYLLYGPPGTGKSSLVAAIANYLKFDVYDLELNSVFSNSDLMRAIRNTSNRSIIVIEDIDCNKEVQPRSATEGLSNPQDSECDKDGFGKGKGFTLSGLLNYMDGLWSSCGEERIMVFTTNHKERIDGALLRPGRMDMHINLSFLKGKGFRVLASNYLGLDGHHPLFQQIDDLLEKTEVTPAVVAEHLMRYEDPHHSLEAIVKFLTQMDAQNQVELQFTSTTTTTQST 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00851 473 CDD AAA 233 388 - -
Aip05g00851 473 SMART AAA_5 244 391 IPR003593 -
Aip05g00851 473 Gene3D - 200 385 IPR027417 -
Aip05g00851 473 PANTHER BCS1 AAA-TYPE ATPASE 15 458 - -
Aip05g00851 473 Gene3D - 386 454 - -
Aip05g00851 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 438 IPR027417 -
Aip05g00851 473 ProSitePatterns AAA-protein family signature. 359 377 IPR003960 GO:0005524|GO:0016887
Aip05g00851 473 Pfam ATPase family associated with various cellular activities (AAA) 249 387 IPR003959 GO:0005524|GO:0016887
Aip05g00851 473 Pfam Domain associated at C-terminal with AAA 43 140 IPR025753 -
Aip05g00851 473 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 15 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00851 Aip-Chr5 11584284 11585989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00851 237 385 Miscellaneous Gene Families AT3G02450 33.544 9.46e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00851 - K08900 gmx:100789094 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00851 05 11584284 11585989 Aip05g00851 05 11584284 11585989 ECH