Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00849 ATGTTTTCCCAAAGAGAGATGCCATCAGCGTCATCAATGTTCTCCGCATATGCATCCATGGCAGCATCCATGATGCTGCTGCGATCAATGGCGAACGAGCTCATTCCGCAGCCGATCAGAGGCTACATCCTGAATGCCTTCCACTACTTAGTGAAGCCGAGATCCCAGTCGCTGACCCTGGTGATCGAGGAATCCAACGGCATAGCACGCAACCACGTGTACGATGCAGCCGAGGCCTACTTGTCCACCAGAGTGAGCCCCGACAACGAGAGGCTCAAAATCTGCAAGAGCCCCAAGGAGAAGAAGCTCACCATCCGCCTCGAAAAGGGGGAGAAGCTGCTGGATCTGTACGACGGCGTGTCCCTCCGCTGGAGGTTCATCTGCGCCGAGTCCGACAAGAATGCCCCCAGCGAGAACACCAGTATTAGTAGCAACGTATCGGTGAGGTCGGAGAAGCGCTACTTCGAGCTGAGTTTCCACAAGAAGCACAAGCAAATGGTGTTGGAGTCTTATCTGCCTTTCGTTCTCGACAAGGCGAAGGAGATGAAGGACGACGAGAGGGTTCTGAAGATGCATACTCTCAACACTTCTTACTGTTACGGTGGTGTGAAGTGGGATTCCATCAATCTGGAGCACCCTTCCACTTTCGAGACGCTTGCTATGGACTCGGAGCAGAAGGAAGCCATCATGGAGGACCTCAACAGGTTCGTGAAGAGGAGGGAGTTTTACAAGAGAGTCGGGAGGGCGTGGAAGCGTGGCTACTTGCTCTATGGACCTCCGGGGACTGGAAAATCAAGCTTGATTGCTGCCATGGCTAATTACCTCAAGTTTGATATCTATGACTTGCAGCTTGCTAACATAGTCAGGGATTCCGATCTCCGAAAGCTGCTGCTGGCAACTGCCAATAGGTCCATTCTTGTAATCGAAGACATTGATTGCAGCGTCGATCTTCCCGAGCGTCGCCATGTTGATCATCACCATCATCATGGACGTAAACAAACTGATGTACAGTTAACATTGTCCGGATTGCTGAACTTCATAGATGGGCTATGGTCAAGCTGCGGGGACGAGAGAATCATCATATTCACGACGAACCACAAGGAAAGGCTAGACCCTGCTCTTCTCAGACCAGGAAGAATGGACATGCACATTCACATGTCCTACTGCTCCTTCCAAGCCTTCAAGATCCTTGCCTCCAACTACCTGGACATCTCGTCCGACCACCACCACCACCTCTTTCCGGAGATCGAAGGGCTGATCGAGGACACTCAGATCACCCCTGCTCATGTGGCAGAGGAGCTGATGAAGAGTGAAGACGCCGACGTGGCCCTCCAAGGATTCGTGAAGCTCCTCAAGCGGAAGAAGATGGAAGGTGATGTTTGCGAGAATGATGATCCGGATAACAAAGCTGAACCTGCTACTAAGCAATCTAAGAAGCGCAAGGTTGCTTGCAAGCAAAAGAAAACTGTAGCTGCTGCTGGTACACAGAGAAGGACAAGAAGGCTTAGTAGAGGCTCTAGTTTGTAA 1527 0.5134 MFSQREMPSASSMFSAYASMAASMMLLRSMANELIPQPIRGYILNAFHYLVKPRSQSLTLVIEESNGIARNHVYDAAEAYLSTRVSPDNERLKICKSPKEKKLTIRLEKGEKLLDLYDGVSLRWRFICAESDKNAPSENTSISSNVSVRSEKRYFELSFHKKHKQMVLESYLPFVLDKAKEMKDDERVLKMHTLNTSYCYGGVKWDSINLEHPSTFETLAMDSEQKEAIMEDLNRFVKRREFYKRVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLANIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERRHVDHHHHHGRKQTDVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSFQAFKILASNYLDISSDHHHHLFPEIEGLIEDTQITPAHVAEELMKSEDADVALQGFVKLLKRKKMEGDVCENDDPDNKAEPATKQSKKRKVACKQKKTVAAAGTQRRTRRLSRGSSL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00849 508 CDD AAA 239 388 - -
Aip05g00849 508 Gene3D - 204 384 IPR027417 -
Aip05g00849 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 440 IPR027417 -
Aip05g00849 508 ProSitePatterns AAA-protein family signature. 358 376 IPR003960 GO:0005524|GO:0016887
Aip05g00849 508 SMART AAA_5 250 390 IPR003593 -
Aip05g00849 508 Pfam ATPase family associated with various cellular activities (AAA) 255 387 IPR003959 GO:0005524|GO:0016887
Aip05g00849 508 MobiDBLite consensus disorder prediction 458 478 - -
Aip05g00849 508 PANTHER BCS1 AAA-TYPE ATPASE 6 479 - -
Aip05g00849 508 MobiDBLite consensus disorder prediction 458 508 - -
Aip05g00849 508 Gene3D - 385 458 - -
Aip05g00849 508 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
Aip05g00849 508 PANTHER BNAA10G17020D PROTEIN 6 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00849 Aip-Chr5 11527193 11531490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00849 215 386 Miscellaneous Gene Families AT3G47060 32.796 1.85e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00849 - - gmx:100789621 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00849 05 11527193 11531490 Aip05g00849 05 11527193 11531490 ECH