Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00848 ATGACAAAGTTTCACATAAGTTTCTGTTCCACTGTTAAGGAGGAGGAGAGAGGTGGTGGTGATGGTGAGGGTGGTGGAGTTAAAAATGTTCCTGAAGGTGTAGTGAACAACAAGGGGAACATTTACATGGCGAGCACAAGTCCCTTAAACGTCTTCGAGGCCTATTACGAGCAATTTCAAAGAGACTTCTCTTTGTTTCTCAAGTGTCGTGCTGAAGAGGTGGTTGAAGGGGGCTGTATGATTCTAACATTTTTGGGAAGAAGAAGTGATGACCCATCTAGTAAAGAGTGTTGCTACATTTGGGAACTTCTTGCCATGGCTCTTAATGAAATGGTCTTCGAGGGTATTATAAAGGAAGAAGAAGTGGACAGATTCAACATCCCTCAATACACACCATCCCCATCTGAAGTGAAATCAGAGGTTATGAAAGAAGGCTCATTCAGCATCGATCGCTTAGAGGTTTCTGAAGTACATTGGAATCCTTTTAATGATGATGGCTCCTCATCAGAATTCAGCACCGATGATGGAGGATACCATGTTGCAAACCTCATGCGCTCTGTTGCTGAACCTTTGCTAACCACCCACTTTGGAGAAGCCATAATCGAAGATGCTTTTTGCCGCTACCGAAGAATCTTAACCCGTATTATGTCTAAGGAGACAACTATGTTTATTAATGTCACTGTTTCCATGACACGAACTGCATCATGA 708 0.428 MTKFHISFCSTVKEEERGGGDGEGGGVKNVPEGVVNNKGNIYMASTSPLNVFEAYYEQFQRDFSLFLKCRAEEVVEGGCMILTFLGRRSDDPSSKECCYIWELLAMALNEMVFEGIIKEEEVDRFNIPQYTPSPSEVKSEVMKEGSFSIDRLEVSEVHWNPFNDDGSSSEFSTDDGGYHVANLMRSVAEPLLTTHFGEAIIEDAFCRYRRILTRIMSKETTMFINVTVSMTRTAS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00848 235 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 29 232 IPR005299 GO:0008168
Aip05g00848 235 Pfam SAM dependent carboxyl methyltransferase 31 232 IPR005299 GO:0008168
Aip05g00848 235 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 29 232 - -
Aip05g00848 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 232 IPR029063 -
Aip05g00848 235 Gene3D Vaccinia Virus protein VP39 55 220 IPR029063 -
Aip05g00848 235 Gene3D - 29 219 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00848 Aip-Chr5 11506605 11508161 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00848 K21483 - tcc:18610878 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00848 05 11506605 11508161 Aip05g00848 05 11506605 11508161 ECH