Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00847 ATGGACGTAGCGCATGTACTGCACATGAATGGAGGCGATGGAGAAGCAAGCTATGCAAGAAACTCCTTTCTTCAGCGAAAGGTGATTTGCATGACAAAGGGGATGAGAGAGGAAGCCATAAGGAAGGTGTATTGCAGCAGAAGGCCGAGAAGCCTAGTGATTGCAGACTTGGGTTGCTCTTCGGGACCCAACACGTTGCTTGTGGTATCTGAGGTTATCATGGCGGTGGAGAAGCTTTGCAGAGAACTGAAGCATGATGATGAGTCTCCGGAATACCAAGTATTGATGAATGATCTTCCTGGGAACGATTTCAACAACATCTTCAAGTCGCTTGACTTATTCGTAGAGCAGTTAAGTAAACAAGTGGAAGGTGGGGTTGGTCCATGTTACTTCAGTGGGGTTCCTGGTTCTTTCTATGGCAGGATCTTTCCAACCAAGTCTTTGGATTTTGTCCATTCCTCTTACAGCCTTCAATGGCTATCTCAGGTTCCTGAAGGTGTAGTGAACAACAAGGGGAACATTTACATGGCGAGCACAAGTCCCTTAAACGTCTTCGAGGCCTATTACGAGCAATTTCAAAGAGACTTCTCTTTGTTTCTCAAGTGTCGTGCTGAAGAGGTGGTTGAAGGGGGCTGTATGATTCTAACATTTTTGGGAAGAAGAAGTGATGACCCATCTAGTAAAGAGTGTTGCTACATTTGGGAACTTCTTGCCATGGCTCTTAATGAAATGGTCTTCGAGGGTATTATAAAGGAAGAAGAAGTGGACAGATTCAACATCCCTCAATACACACCATCCCCATCTGAAGTGAAATCAGAGGTTATGAAAGAAGGCTCATTCAGCATCGATCGCTTAGAGGTTTCTGAAGTACATTGGAATCCTTTTAATGATGATGGCTCCTCATCAGAATTCAGCACCGATGATGGAGGATACCATGTTGCAAACCTCATGCGCTCTGTTGCTGAACCTTTGCTAACCACCCACTTTGGAGAAGCCATAATCGAAGATGCTTTTTGCCGCTACCGAAGAATCTTAACCCGTATTATGTCTAAGGAGACAACTATGTTTATTAATGTCACTGTTTCCATGACACGAACTGCATCATGA 1107 0.4435 MDVAHVLHMNGGDGEASYARNSFLQRKVICMTKGMREEAIRKVYCSRRPRSLVIADLGCSSGPNTLLVVSEVIMAVEKLCRELKHDDESPEYQVLMNDLPGNDFNNIFKSLDLFVEQLSKQVEGGVGPCYFSGVPGSFYGRIFPTKSLDFVHSSYSLQWLSQVPEGVVNNKGNIYMASTSPLNVFEAYYEQFQRDFSLFLKCRAEEVVEGGCMILTFLGRRSDDPSSKECCYIWELLAMALNEMVFEGIIKEEEVDRFNIPQYTPSPSEVKSEVMKEGSFSIDRLEVSEVHWNPFNDDGSSSEFSTDDGGYHVANLMRSVAEPLLTTHFGEAIIEDAFCRYRRILTRIMSKETTMFINVTVSMTRTAS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00847 368 Gene3D Vaccinia Virus protein VP39 21 353 IPR029063 -
Aip05g00847 368 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 1 365 - -
Aip05g00847 368 Pfam SAM dependent carboxyl methyltransferase 38 365 IPR005299 GO:0008168
Aip05g00847 368 Gene3D - 6 352 IPR042086 -
Aip05g00847 368 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 365 IPR005299 GO:0008168
Aip05g00847 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 365 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00847 Aip-Chr5 11489538 11499546 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00847 K21483 - gmx:100170650 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00847 05 11489538 11499546 Aip05g00847 05 11489538 11499546 ECH