Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00845 ATGAAGATTGATCAAGTGCTCCATATGAATGAAGGAATGGGGGAAGCCAGTTATGCCAGGAACAGCTTGCTTCAGCAAAAGGCAATTTCAATAGCGAAGCCCATGATAGAGGAAGCAATAACAACCCTATATTGCAACACACTCCCAAGAAACCTTGCCATTGCTGACTTAGGATGTTCTTCAGGCCCAAACACTTTCTTTGTAGTCACCCAAATTATCAAATTCGTAGAAACACTTTCCCAACAACTGAACCGTCCCTCACCCGAATACCAGGTCTTGTTGAACGATCTTCCGGCCAACGACTTTAACTCCATCTTCAAGTCTATTCCCACCTTTAAACATGAGCTCTATAATGAAATCCAAGCTAATAAGATTGGTCATTGTTTCATTTCTGGAGTTCCTGGTTCTTTCTATGGCAGACTCTTTCCTACCCGATCTCTGCATTTTGTCCACTCCTCTTATAGCCTGCATTGGTTGTCTCAGGTTCCTGAGGGTATAGAGAAGAACAACAAAGGGAACATTTATATAACGAGGACAAGCCCAAAAAAGGTGTTGAAGGCATACTACGAGCAATTTGAGAGAGACATTTCATGGTTTCTAAGGAGCCGTGCAGAGGAGTTGGTAGAAGGAGGGTGTATGGTTCTCACAATCTTGGGAAGAAGAAGCGAAGACCCAAGCAGCAAGGAGTCCGCAGTTCACATTTATGAGCTCTTTGCAAACGCTCTCAATCACTTGGTCTTCAAGGGACTCATTCAAGCTGATCAACTTCACAGCTTTAACATTCCAAACTACATTCCATCCTCATCGGAACTCAAACTCCAGATCTTAAAACAAGGCTCCTTCAAAATCAACCGCACCGAGGTGTCATCCGTGCACTGGACCCATTGCGGCAGTGATAATGAACACAAAAGCGGTGCATATAACGTAGCCAAGTGCATGAGGGCCGTGCTAGAACCTTTGGTTCTCCAACACTTTGGTGAAGCCATCATTGATGAGGCTTTTCGGGTGTTCCAGGAGCTCTTAGCCGATACTATAGAGGTATCTCCAAATAATGATGTAGATATATAA 1068 0.4391 MKIDQVLHMNEGMGEASYARNSLLQQKAISIAKPMIEEAITTLYCNTLPRNLAIADLGCSSGPNTFFVVTQIIKFVETLSQQLNRPSPEYQVLLNDLPANDFNSIFKSIPTFKHELYNEIQANKIGHCFISGVPGSFYGRLFPTRSLHFVHSSYSLHWLSQVPEGIEKNNKGNIYITRTSPKKVLKAYYEQFERDISWFLRSRAEELVEGGCMVLTILGRRSEDPSSKESAVHIYELFANALNHLVFKGLIQADQLHSFNIPNYIPSSSELKLQILKQGSFKINRTEVSSVHWTHCGSDNEHKSGAYNVAKCMRAVLEPLVLQHFGEAIIDEAFRVFQELLADTIEVSPNNDVDI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00845 355 Gene3D Vaccinia Virus protein VP39 21 292 IPR029063 -
Aip05g00845 355 Pfam SAM dependent carboxyl methyltransferase 38 344 IPR005299 GO:0008168
Aip05g00845 355 PANTHER OS05G0102000 PROTEIN 6 343 - -
Aip05g00845 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 348 IPR029063 -
Aip05g00845 355 Gene3D - 6 346 IPR042086 -
Aip05g00845 355 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 6 343 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00845 Aip-Chr5 11330861 11333758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00845 K21483 - gmx:100813166 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00845 05 11330861 11333758 Aip05g00845 05 11330861 11333758 ECH