Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00839 ATGGGAACACTGGGCAGAGCTTTTTACACCGTTGGATTCTGGATCCGCGAGACTGGCCAAGCCCTTGATCGCCTTGGCTCCCGCCTCCAGGGCAATTACTTCTTCCAGGAACAACTGTCAAGGCATCGACCTCTGATGAATGTCTTCGATAAGGTTCCTGTGGTCCACCGGGATGCTTTCGTGGCACCTAGCGCCTCCATCACCGGCGATGTTCACGTTGGCCATGGTTCTTCCATTTGGTATGGATGTGTTCTTAGAGGTGATGTTAACAACATTAGTATTGGATCTGGAACTAATATACAAGACAATACTCTTGTTCATGTTGCCAAGTCTAATTTGAGTGGAAAGGTTTTGCCAACTATCATTGGAGATAATGTCACTGTCGGACATAGTGCTGTGTTACAAGGATGCACTGTTGAGGATGAGGCATTTATTGGCATGGGCGCAACCTTGCTTGATGGTGTATATATTGAGAAGCACGCCATGGTTGCTGCTGGAGCTCTTGTCAGGCAGAACACAAGGATTCCCTATGGAGAGGTTTGGGGAGGTAATCCAGCAAGGTTTCTGAGGAAGCTCACTGAAGACGAAATGGCCTTCTTCTCACAATCTGCCTTAAATTATTCCAATTTGGCTCAGGCTCATGCAGCTGAGAATGAGAAAGAACTTGATGCAACTGAATTTGAGAAAGTAGTTCGAAAGAAGTTTGCTCGTGGTGATGGAGAACATGATTCAGTGCCTAACCTTTCGGATGATGTTTTGCTAGACAAATCATCAAAGGCTTCTTAG 786 0.4618 MGTLGRAFYTVGFWIRETGQALDRLGSRLQGNYFFQEQLSRHRPLMNVFDKVPVVHRDAFVAPSASITGDVHVGHGSSIWYGCVLRGDVNNISIGSGTNIQDNTLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYIEKHAMVAAGALVRQNTRIPYGEVWGGNPARFLRKLTEDEMAFFSQSALNYSNLAQAHAAENEKELDATEFEKVVRKKFARGDGEHDSVPNLSDDVLLDKSSKAS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00839 261 MobiDBLite consensus disorder prediction 238 261 - -
Aip05g00839 261 Gene3D Hexapeptide repeat proteins 44 223 - -
Aip05g00839 261 CDD LbH_gamma_CA_like 54 212 - -
Aip05g00839 261 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 245 - -
Aip05g00839 261 SUPERFAMILY Trimeric LpxA-like enzymes 45 212 IPR011004 -
Aip05g00839 261 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Aip05g00839 261 PANTHER DYNACTIN SUBUNIT P25 1 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00839 Aip-Chr5 11254837 11257582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00839 K01726 - gmx:100782403 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00839 05 11254837 11257582 Aip05g00839 05 11254837 11257582 ECH