Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00819 ATGGCTGCAGGGAAGAGCTTCTGCTGTCAAGCATCTTTGTTAATACTACTATTCTTTGTCTTTCTTGGATTAGTCTCTTTTCCAGTTGAAGCTGCCATAAAGAAATACCAATTTGATATTCAAGTGAAGAATGTGAGTAGGCTGTGCCATGCAAAACCCATTGTAACAGTAAATGGGAGGTACCCAGGGCCAACTATTTATGCTAGAGAAGGAGACAGAGTACTAGTCAATGTCACCAACCATGCACAATATAATTTGTCAATTCACTGGCATGGACTTAAACAATATCGTAATGGTTGGGCTGATGGACCAGCTTATATTACACAATGTCCAATTCAAACAGGTGGCAGCTACACCTATGACTTCAATATCACAGGCCAAAGAGGAACACTGTGGTGGCATGCTCATATTCTGTGGTTGAGGGCTACTGTGTATGGTGCAATTGTTATCATGCCCAAAGTTGGAACACCATTTCCTTTTCCACAGCCAGCAAGAGAATTTGAAGTTCTTCTAGGAGAATGGTGGAACAATGATGTGGAAGAGATTGAGAAGCAAGGGAACCAAATGGGGTTACCACCAAACATGTCAGATGCACATACAATCAATGGCAAACCAGGACCTCTATTTCCTTGTTCTGAGAAACATACGTATGCAATTGAGGTTGAGAAAGGCAAAACTTACCTGCTGAGAATCATCAATGCTGCCCTCAATGACGAACTCTTTTTCGCCATTGCCGGGCATAACTTCACAGTAGTTGAGGTTGATGCAGTTTACACAAAACCATTCTCCACAAATTCCATACTAATTGGACCAGGACAAACCACAAACGTTTTGGTCCATGCCAACAATGTTCCAAGCAGGTATTTCATGGCCACAAGGACCTTCATGGATGCTCCAATCCCAGTTGACAACAAAACTGCCACAGCTATACTCCAATACAAAGGAATTCCAAACACTGTGATCCCTTCTCTTCCTCATCAACTTCCTGCTAGCAATGACTCAGCTTTTGCTCTGAGTTACAACAAGAAACTCAAGAGCCTTAACACTGTACAGTACCCTGCTAATGTTCCTCTCAAAGTTGACAGAAAACTCTTCTTCACCATTGGTTTAGACAAGAATCCTTGCCCAACATGTGTCAATGGAACGAGGCTACTTGCTTCATTGAACAATATCTCATTTGTGATGCCACAAACTGCACTTCTTCAAGCACACTACTTCGATATCAAGGGAGTTTTCAAGACTGATTTCCCTGACCAGCCTTTGAGACCTTTCAACTACACCGGTGCTCCGTTAACGGCCAATCTTGGAACTTCAACAGGGACAAGAATCAGCAAGGTTGCTTTCAACTCCACGGTGGAGATAGTGGTTCAAGATACCAATCTCCTGACAGTAGAGTCACACCCGTTCCACCTTCATGGATATAACTTCTTTGTTGTTGGAACTGGTGTTGGTAACTTTGATCCATCTAAAGACCCTGCAAACTACAATTTGGTTGACCCCATTGAAAGGAACACCGTTGGAGTTCCCACCGGTGGTTGGGTAGCTATTCGTTTCAGGGCTGATAATCCAGGTGTTTGGTTCTTTCATTGTCATTTGGAGTTGCACACCGGTTGGGGCTTGAAAACCGCATTTGTTGTAGAAGATGGCCCAGGACAGGATCAGACTGTTCTTCCTCCACCAAAGGACCTTCCAGCATGCTAA 1701 0.435 MAAGKSFCCQASLLILLFFVFLGLVSFPVEAAIKKYQFDIQVKNVSRLCHAKPIVTVNGRYPGPTIYAREGDRVLVNVTNHAQYNLSIHWHGLKQYRNGWADGPAYITQCPIQTGGSYTYDFNITGQRGTLWWHAHILWLRATVYGAIVIMPKVGTPFPFPQPAREFEVLLGEWWNNDVEEIEKQGNQMGLPPNMSDAHTINGKPGPLFPCSEKHTYAIEVEKGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFSTNSILIGPGQTTNVLVHANNVPSRYFMATRTFMDAPIPVDNKTATAILQYKGIPNTVIPSLPHQLPASNDSAFALSYNKKLKSLNTVQYPANVPLKVDRKLFFTIGLDKNPCPTCVNGTRLLASLNNISFVMPQTALLQAHYFDIKGVFKTDFPDQPLRPFNYTGAPLTANLGTSTGTRISKVAFNSTVEIVVQDTNLLTVESHPFHLHGYNFFVVGTGVGNFDPSKDPANYNLVDPIERNTVGVPTGGWVAIRFRADNPGVWFFHCHLELHTGWGLKTAFVVEDGPGQDQTVLPPPKDLPAC 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00819 566 CDD CuRO_1_LCC_plant 36 152 IPR034288 GO:0005507
Aip05g00819 566 ProSitePatterns Multicopper oxidases signature 2. 529 540 IPR002355 GO:0005507
Aip05g00819 566 Gene3D - 376 566 IPR008972 -
Aip05g00819 566 SUPERFAMILY Cupredoxins 26 177 IPR008972 -
Aip05g00819 566 Pfam Multicopper oxidase 40 153 IPR011707 GO:0005507
Aip05g00819 566 CDD CuRO_2_LCC_plant 169 313 IPR034285 -
Aip05g00819 566 Pfam Multicopper oxidase 433 548 IPR011706 GO:0005507|GO:0016491
Aip05g00819 566 TIGRFAM laccase: laccase 31 566 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aip05g00819 566 CDD CuRO_3_LCC_plant 411 549 IPR034289 GO:0005507
Aip05g00819 566 ProSitePatterns Multicopper oxidases signature 1. 524 544 IPR033138 -
Aip05g00819 566 Gene3D - 25 152 IPR008972 -
Aip05g00819 566 PANTHER MULTI-COPPER OXIDASE 13 566 IPR045087 -
Aip05g00819 566 PANTHER LACCASE 13 566 - -
Aip05g00819 566 SUPERFAMILY Cupredoxins 160 342 IPR008972 -
Aip05g00819 566 Pfam Multicopper oxidase 169 315 IPR001117 -
Aip05g00819 566 Gene3D - 164 350 IPR008972 -
Aip05g00819 566 SUPERFAMILY Cupredoxins 356 566 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00819 Aip-Chr5 10892999 10895495 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00819 K05909 - gmx:100820452 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00819 05 10892999 10895495 Aip05g00819 05 10892999 10895495 ECH