Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00808 ATGGCAGCTGCTAGGTTAACCACTTGCGCCGCGGTGGCAGCCGCGGTGGCTTCCATGTCCTCGCTTTCCGATCGCGCCGCCCACGCCGATTCTTCTTTTCGCTTCCCGTTCTTCTCTTCTTCACCTTCCAATTCGCCGTCGCCGTCCGACCCTGCTTCCGATTCTAAGACGGAGCAGCCTACCCCCGATGAACCTAACAAGTCCGGTCAATCTGCGTTTTTGCTAATACATTTCGGGGTTGTTTTGCAGGTGTTTGACTTAATGCGAAAGCAGGAACAAACTCGCCTTGCTGAGTTAGATGCTGAGAAAGTTCATTTTGAACTTATTCAATCTCAAGGAGATATTGAAAGGCAGCAGAAAATGGCTGAAGAACAGCGAAATCTAATGCAAGAGCAAGCTCAGAAACAGGCCCAGGTGCTGCGATATGAAGATGAATTGGCAAGGAAAAGAATGCAGACAGATCATGAAGCTCAAAGGCGACACAATGTTGAATTGGTCAAGATGCAAGAGGATTCTTCTGTAAGAAAGGAGCAGGCAAGACGGGTTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGAAAGAGAGCGTGCTGAGATAGAAAGAGAAACTATCAGAGTTAAAGCAATGGCAGAGGCTGAAGGTCGAGCGCTTGAAGCAAAATTGACTGAGGATCATAAAAGGAGAATGCTTATAGAACGGATGCAGGGTGAAAGAGATAAATGGCTTGCTGCGATCAACACAACCTTTGGTCATATTGAAGGTGGTTTAAGGGCCTTGTTGACTGATAGGGACAAATTGGTTATGACTGTTGGGGGAGCTACTGCATTAGCTGCCGGAGTATATACAACTAGAGAAGGTGCTAAAGTTACATGGGGCTATATAAATCGGATTTTGGGGCAGCCATCATTGATCCGGGAATCATCCATGGCAAAGTTTCCAGGCTCAAGAATCATATCTCAAGCCAAAAATAGAGTCTTGAATTATAGTACTATGGCCAGGGCAGAAAAGCCTGTTGAGAGTCAAAATGGTGGTCTTGGAAATGTAATCCTCCATCCATCATTGCAGAAAAGAATAGAGCATCTTGCACGGGCAACATCAAATACCAAGGTTCATCAGGCACCATTCCGTAACATGCTTTTTTACGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGGAAATCGGGTTTGGATTATGCTATGATGACTGGAGGAGATGTTGCACCTTTGGGCCCACAGGCTGTTACCAAAATTCATGAGATATTTGATTGGGCCAAGAAATCAAGAAAGGGTTTATTGCTTTTCATTGATGAGGCCGATGCTTTCCTGTGCGAGCGTAACAGCACTCACATGAGTGAAGCTCAACGAAGTGCACTAAACGCATTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATTGTACTTGTCCTTGCCACCAACAGACCCGGTGATCTTGATAGTGCAGTCACTGATCGCATTGACGAAGTGATTGAATTCCCCCTCCCTGGAGAGGAGGAACGTCTAAAATTATTGAAGCTCTATTTGAACAATTATCTATGTACTGACAATAATGGCTCCAAGAGAGGCATGTTGCTGAAGAAGCAGACCCAGAAGATTACGGTAAAAGATTTATCCGAGGATGTGCTAAGAGAGGCTGCCAAGAAAACAGAGGGATTTTCTGGGCGCGAGATAGCCAAACTTGTGGCCGGTGTCCAAGCTGCTGTTTATGGGCGCCCAGACTGCACCTTGGATTCTCAGTTGTTCAAAGAAATCGTAGATTATAAAGTGGTGGAACATCATCAGCGATTAAAACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCATTGATCTGA 1923 0.4394 MAAARLTTCAAVAAAVASMSSLSDRAAHADSSFRFPFFSSSPSNSPSPSDPASDSKTEQPTPDEPNKSGQSAFLLIHFGVVLQVFDLMRKQEQTRLAELDAEKVHFELIQSQGDIERQQKMAEEQRNLMQEQAQKQAQVLRYEDELARKRMQTDHEAQRRHNVELVKMQEDSSVRKEQARRVTEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRALEAKLTEDHKRRMLIERMQGERDKWLAAINTTFGHIEGGLRALLTDRDKLVMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIISQAKNRVLNYSTMARAEKPVESQNGGLGNVILHPSLQKRIEHLARATSNTKVHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNNYLCTDNNGSKRGMLLKKQTQKITVKDLSEDVLREAAKKTEGFSGREIAKLVAGVQAAVYGRPDCTLDSQLFKEIVDYKVVEHHQRLKLXXXXXXXXXXXXXXXXXXXXXXXXXXSLI 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00808 640 PANTHER PUTATIVE ATP-ASE 1 613 IPR039188 GO:0005739|GO:0007005
Aip05g00808 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 603 IPR027417 -
Aip05g00808 640 Coils Coil 638 640 - -
Aip05g00808 640 Coils Coil 115 145 - -
Aip05g00808 640 SMART AAA_5 376 509 IPR003593 -
Aip05g00808 640 MobiDBLite consensus disorder prediction 35 68 - -
Aip05g00808 640 MobiDBLite consensus disorder prediction 35 69 - -
Aip05g00808 640 Gene3D - 322 523 IPR027417 -
Aip05g00808 640 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 613 - -
Aip05g00808 640 Pfam ATPase family associated with various cellular activities (AAA) 380 507 IPR003959 GO:0005524|GO:0016887
Aip05g00808 640 Coils Coil 180 207 - -
Aip05g00808 640 ProSitePatterns AAA-protein family signature. 479 498 IPR003960 GO:0005524|GO:0016887
Aip05g00808 640 CDD AAA 372 507 - -
Aip05g00808 640 Pfam ATPase family AAA domain-containing protein 3, N-terminal 83 307 IPR021911 -
Aip05g00808 640 Coils Coil 606 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00808 Aip-Chr5 10761485 10765588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00808 356 583 Miscellaneous Gene Families AT5G53170 29.958 1.56e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00808 K17681 - gmx:100777755 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00808 05 10761485 10765588 Aip05g00808 05 10761485 10765588 ECH