Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00803 ATGAGAGAGGCGAAAGAAGATAGCAGTAGCGGTGAGGATGGAAACAAGGAGCTTAGGAAGCCATTCCTCCACAATGGGAGTTGGTACAAGATGTTGGGTTCTAGACAGTCCAGCATCATAGGATCTTCAATTCAGGTGGTGCGAGATTCCTCTGTCTCCATTCTCTTCTGCGTCCTCATCGTTGCTCTGGGTCCCATTCAGTTTGGTTTCACGTGTGGATATTCTTCCCCCACTCAGGAAAGTATAATTAGTGATCTCAAGCTCTCACTTTCAGAGTTCTCTTTATTCGGATCATTATCCAATGTGGGGGCGATGGTGGGAGCTATAGTCAGTGGTCAAATGTCTGAATACATTGGTCGCAAAGGGTCATTGATGATTGCTGCAATCCCAAATATAATAGGATGGCTCGCAATCTCTTTTGCCAAGGACTCGTCTTTTCTGTTTATGGGGAGATTATTGGAAGGTTTCGGCGTTGGTATAATATCTTACGTGGTTCCTGTTTATATAGCTGAGATATCACCTCAAAACATGAGAGGTACCCTTGGATCGGTCAATCAGCTCTCTATCACAATTGGAATAATGTTGGCATACCTCTTAGGCCTTTTTGTTAACTGGAGAGCACTTGCAGTTCTAGGAACTTTGCCTTGTACAGTTTTAATACCCGGATTATTTTTTATACCGGAATCTCCCCGATGGTTGGCCAAGATGGGGATGACAGAAGAGTTTGAGACTTCTTTGCAAGTGTTGCGAGGATTTGACACAGATATATCTATTGAAGTACACGAAATTAAGAGATCGGTGGCGTCGACCGGAAAGACACATACAATCCGGTTTGCAGATCTCAAGATGAAAAGATATTGGTATCCTTTAATGGTAGGGATTGGATTACTAGTACTCCAACAATTGAGTGGTACCAATGGGGTGTTGTTCTATTCAAGTACCATCTTTGCAAACGCAGGAATTTCATCTAGCAATGCTGCTACAGTTGGACTTGGAGCTATTCAGGTCATAGCTACTGGACTGACTACTTGGTTAGTCGACAAAAGTGGCCGGCGGCTGCTTTTAATAATATCTTCATCTGTAATGACAATTAGCCTTCTTATTGTTTCTATAGCATTCTATCTGGAGGGGTTCACATCTGTGGATTCTCATCTTTACAGCATTTCAGGAATAGTTTCTGTTGTTGGGTTAGTGACTATGGTGATTGGTTACTCTCTAGGTGTTGGACCTATTCCTTGGCTTATAATGTCTGAGATACTTCCAGTGAATATAAAGGGCCTTGCAGGGAGTATAGCCACTTTGACAAATTGGTTGACTTCCTGGATGATCACAATGACCGCAAACTTGCTTTTGACATGGAACAGTGCAGGAACATTCGCAATCTACACCGTGGTAGCTGCTTTTACTGTTGCTTTTTCGGCAATATGGGTTCCTGAGACTAAGGGAAGAACTTTGGAAGAAATTCAGTTTTCTTTTAGATAG 1482 0.4258 MREAKEDSSSGEDGNKELRKPFLHNGSWYKMLGSRQSSIIGSSIQVVRDSSVSILFCVLIVALGPIQFGFTCGYSSPTQESIISDLKLSLSEFSLFGSLSNVGAMVGAIVSGQMSEYIGRKGSLMIAAIPNIIGWLAISFAKDSSFLFMGRLLEGFGVGIISYVVPVYIAEISPQNMRGTLGSVNQLSITIGIMLAYLLGLFVNWRALAVLGTLPCTVLIPGLFFIPESPRWLAKMGMTEEFETSLQVLRGFDTDISIEVHEIKRSVASTGKTHTIRFADLKMKRYWYPLMVGIGLLVLQQLSGTNGVLFYSSTIFANAGISSSNAATVGLGAIQVIATGLTTWLVDKSGRRLLLIISSSVMTISLLIVSIAFYLEGFTSVDSHLYSISGIVSVVGLVTMVIGYSLGVGPIPWLIMSEILPVNIKGLAGSIATLTNWLTSWMITMTANLLLTWNSAGTFAIYTVVAAFTVAFSAIWVPETKGRTLEEIQFSFR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00803 493 CDD MFS_GLUT6_8_Class3_like 55 487 IPR044775 GO:0008643|GO:0051119
Aip05g00803 493 ProSiteProfiles Major facilitator superfamily (MFS) profile. 57 481 IPR020846 GO:0022857
Aip05g00803 493 Pfam Sugar (and other) transporter 58 489 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip05g00803 493 PANTHER - 19 491 - -
Aip05g00803 493 ProSitePatterns Sugar transport proteins signature 2. 153 178 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip05g00803 493 ProSitePatterns Sugar transport proteins signature 1. 111 128 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip05g00803 493 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 19 491 - -
Aip05g00803 493 TIGRFAM SP: MFS transporter, sugar porter (SP) family 37 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00803 493 Gene3D MFS general substrate transporter like domains 48 493 IPR036259 -
Aip05g00803 493 PRINTS Sugar transporter signature 65 75 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00803 493 PRINTS Sugar transporter signature 148 167 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00803 493 PRINTS Sugar transporter signature 300 310 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00803 493 PRINTS Sugar transporter signature 394 415 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00803 493 PRINTS Sugar transporter signature 417 429 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00803 493 SUPERFAMILY MFS general substrate transporter 58 489 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00803 Aip-Chr5 10698283 10702769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00803 5 493 Organic Solute Cotransporters AT1G75220 76.278 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00803 K03444 - gmx:100813399 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00803 05 10698283 10702769 Aip05g00803 05 10698283 10702769 ECH