Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00799 ATGGTGCACAGCGCTTACGACTGTGTGGAGCTGGTTGCCGATTGCCCTTCCAAGATCGATGCCGTCGAATCCTACGGCTCCAAGCTCCTCGCCGCATGCTCCGATGGATCTCTCCGCATCTACTCTCCCCAGTCCCACTCACAACCCTCCGATCACCACTCTCCCCTCCACCAAGAACCTTACGCGCTCGAGAAGACCCTCGCCGGTTTCGCCAGGAGGCCTCTCATCTCCATGGAGGTCCTCCACTCCAGGGAGCTCCTCCTCTCTCTCTCCGAATCCATCGCCTTCCACCGCCTCCCTTCCTTCGAGACCTTCGCCGTCATCACCAAGGCCAAGGGCGCCAACGCCTTTGATTGGGACGATCGCCGCGGCTTCCTCTGCTTCGCTCGCCAGAAGCGCGTCTGCATCTTCCGACATGACGGTGGGAGGGGATTCGTAGAGGTGAAGGAGTTCGGTGTTCCGGACGTGGTGAAGTCCATGTGTTGGTGCGGTGAGAATATCTGTTTGGGGATTCGAAGAGAGTATGTCATTCTCAACGCTACAAACGGCGCTTTATCTGAGGTCTTCACTTCCGGTAGACTTGCGCCACCGCTAGTAGTTTCTCTCCCTTCCGGAGAGCTTCTTCTCGGAAAGGAGAATATTGGGGTATTTGTGGACCAGAATGGGAAGCTTCTTCCAGAAGGTAGGATTTGTTGGTCGGAGGCACCCACGGAGGTTGTAATTCAGAAGCCATATGCCGCTGCTCTACTGCCAAGATTTGTGGAGATTCGATCACTCCGTGATCCTTATCCGCTGATTCAAACAGTTGTTCTTCGAAATGTTCGCCATATCCGACACAGCAATAACTCTACGATACTTGCTTTAGATAATTCTATACATGGCCTCTTCCCTGTTCCTCTTGGAGCCCAGATTGTCCAATTAACAGCATCCGGAAACTTTGAGGAGGCCTTGTCATTATGCAAGCTCCTTCCACCTGAAGATGCAAGTCTGCGTGCTGCAAAGGAGGGGTCTATTCATATTAGATATGCCCACTATCTTTTTGAGAATGGGAACTATGAGGAGGCAATGGAACATTTTCTGGCATCTCAAGTAGATATAACCTATGTTCTTTCTCTATATCCGTCCATTATCCTTCCAAAGACAACTATTGTTCATGAGCCAGAGAAGTTGGACATTTATGGGGATGCTTCATATCTCCCCAGAGGTTCTTCAGGCTTGTCAGATGATATGGAATACCCATCAACATCTCATATGTTAGAATCTGATGAGCATGTGGCACTTGAATCCAAAAAAACAAGCCATAATATGCTTATGGCACTAATAAAGTATTTACAGAAGAAGAGAAATAGTTTTATAGAGAAAGCAACTGCAGAGGGAACGGAAGAAGTTGTTTTAGATGCAGTTGGGAATAACTTTGCATCCTACAATAGATTTAAGAAAACAAACAAGGGGCGTGGTAGTATACCCATTAGCTCCGGAGCTCGGGAGATGGCTTCAATATTAGACACTGCTCTACTCCAAGCATTGCTTCTTACTGGACAATCTTCTGCTGCTTTAGAGTTACTGAGAGGTCTTAACTACTGTGATTTGAAAATATGTGAAGAAATTCTTCAAAAGGGAAATCATCATGCTGCTTTATTAGAACTTTACAAGTGCAACTCATTGCACCGGGAAGCACTTGAACTTCTTCACAAATTGGTGGAAGAGTCAAAGTCTAGCCAGTCAGAAATTACCCATAGGTTTAAGCCTGAGGACATCGTTGAGTATCTTAAGCCACTGTGTGGGACAGACCCCATACTTGTTCTAGAGTTCTCGATGCTTGTTCTTGAAAGCTGTCCAACGCAAACTATTGAGCTCTTTCTGTCCGGCAATATTCCAGCTGATATGGTGAACTCGTATTTGAAGCAGCATTCTCCAAACATGCAAGCTAGATACTTGGAGCTCATGCTTGCAATGAACGAGAATGCCATATCTGGCAATTTGCAAAGTGAAATGGTAAACATCTATCTCTCAGAGGTGCTTGATTGGTACACGGATTTATGTGCTCAACAGAAATGGGATGAGAAGGTTTATTCCCCAACAAGGAAAAAGCTGTTGTCTGCCTTAGAGAGTATATCTGGTTACAATCCAGAGACTCTGCTGAAACGTTTTCCCCCAGATGCATTATATGAAGAGCGTGCAATATTGTTGGGAAAAATGAACCTACATGAACTGGCATTATCTTTGTATGTTCATAAGCTTAATGTTCCAGAAATGGCTTTGTCTTATTGTGATCGGGTGTATGAGTCTATGCATCAGACATCGGTTAAATATCCCAACAACATATACCTTACGCTTATGCAAATCTATTTGAATCCTCGGAGGACAACTGCAAGCTTTGAAGACAAAATTATAAATATGTTGTCCCCTCAGAATACCACCACACGAAAAGTTGGTTCAGCAACATCAGTAAAACCTAAAGGAACCCGAGTAACCAAGAAAATTGCTTCAATAGAAGGAGCAGAGGACACAAAAGTTAGTTCAAGCAGCACCGACAGTAGCAGAAGTGATGGGGATGGGGATGAATTTAGTGAGGATGGTTCTACTATCATGCTTGATAAGGTCCTTGATTTGTTGGGACGCAGATGGGACAGAATAAATGGAGCTCATGCCCTTAAACTTTTACCAAGAGAGACTAAATTACAGGACTTGCTTTCATTTCTTGGACCCCTTGTTAGAAAATCCAGTGAAATGCAGCGTAATTGCTCAGTCATCAAGAGCCTGAGACAGAGTGAGAATCTTCAGGTGAAAGATGAACTCTATAGTCAGAGGAAAGCAGCTGTGAAGATAAGCAGTGAAAGCATGTGTTCTTTGTGCCACAAGAAGATAGGGACTAGTGTTTTCGCAGTCTACCCGAATGGGAGCACTCTCGTGCACTTTGTCTGTTTCAGAGATTCTCAAAATATGAAAGCTGTGGCCAAAGGGTCTCAAATGAGGAGGCGATTATGA 2988 0.4518 MVHSAYDCVELVADCPSKIDAVESYGSKLLAACSDGSLRIYSPQSHSQPSDHHSPLHQEPYALEKTLAGFARRPLISMEVLHSRELLLSLSESIAFHRLPSFETFAVITKAKGANAFDWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMCWCGENICLGIRREYVILNATNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPTEVVIQKPYAAALLPRFVEIRSLRDPYPLIQTVVLRNVRHIRHSNNSTILALDNSIHGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEDASLRAAKEGSIHIRYAHYLFENGNYEEAMEHFLASQVDITYVLSLYPSIILPKTTIVHEPEKLDIYGDASYLPRGSSGLSDDMEYPSTSHMLESDEHVALESKKTSHNMLMALIKYLQKKRNSFIEKATAEGTEEVVLDAVGNNFASYNRFKKTNKGRGSIPISSGAREMASILDTALLQALLLTGQSSAALELLRGLNYCDLKICEEILQKGNHHAALLELYKCNSLHREALELLHKLVEESKSSQSEITHRFKPEDIVEYLKPLCGTDPILVLEFSMLVLESCPTQTIELFLSGNIPADMVNSYLKQHSPNMQARYLELMLAMNENAISGNLQSEMVNIYLSEVLDWYTDLCAQQKWDEKVYSPTRKKLLSALESISGYNPETLLKRFPPDALYEERAILLGKMNLHELALSLYVHKLNVPEMALSYCDRVYESMHQTSVKYPNNIYLTLMQIYLNPRRTTASFEDKIINMLSPQNTTTRKVGSATSVKPKGTRVTKKIASIEGAEDTKVSSSSTDSSRSDGDGDEFSEDGSTIMLDKVLDLLGRRWDRINGAHALKLLPRETKLQDLLSFLGPLVRKSSEMQRNCSVIKSLRQSENLQVKDELYSQRKAAVKISSESMCSLCHKKIGTSVFAVYPNGSTLVHFVCFRDSQNMKAVAKGSQMRRRL 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00799 995 PANTHER VACUOLAR SORTING PROTEIN 39 1 994 - -
Aip05g00799 995 Pfam CNH domain 71 275 IPR001180 -
Aip05g00799 995 PANTHER CNH DOMAIN CONTAINING 1 994 IPR032914 GO:0016192
Aip05g00799 995 Pfam Vacuolar sorting protein 39 domain 1 501 609 IPR019452 -
Aip05g00799 995 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 604 790 IPR000547 GO:0006886|GO:0016192
Aip05g00799 995 ProSiteProfiles Citron homology (CNH) domain profile. 16 284 IPR001180 -
Aip05g00799 995 MobiDBLite consensus disorder prediction 808 858 - -
Aip05g00799 995 Pfam Vacuolar sorting protein 39 domain 2 869 977 IPR019453 -
Aip05g00799 995 SUPERFAMILY WD40 repeat-like 25 174 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00799 Aip-Chr5 10568789 10575549 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00799 K20183 - gmx:100805342 1626.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00799 05 10568789 10575549 Aip05g00799 05 10568789 10575549 ECH