Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00797 ATGTTCCTTCTAAGGAAGAAAAGCCAGAATGAGCTGAAAAATGATTCCTCTTGTCAAGATGCAAAGGTTAGTGAACTGAAGGCTTTTATTGGAACCCTGGCCCTAAGTGAGCGTAGTTTAAAGTACTGCACAGATGGATGCCTAAGAAGATACCTTGAAGCTCGGAACTGGGATCTTCATAAATCCAAGAAAATGCTTCTTGACTCGCTCAACTGGAGGTCCTCCTTTAAGCCCGAGGAAATTCGCTGGAGCGATGTAGCACATGAAGGTGAGACAGGGAAAGTCTTCAGAGCAAACCTTCATGACCGAGTTGGAAGAACTGTCCTTATAATGAAGCCAGGGATGCATAAGAACACGACAGCCCCGGAAGATGGCACCAAGTATTTTGTTTACCTAATGGAAAATGCCGTTCTTAATCTTCCTGAAGGACAAGAAAAGATGACATGGTTGCTAGACTTTGATGGATTTTCACTGAGAACTAATATCCCTATCAAAACATCGCGTGATATTATTTACATTTTACAAAACCACTATCCAGAAAGGCTTGGTGTTGTTATTTTTTACAATCCACCAAGAATCTTTGAGGCCTTCTTCAAGGCTGTGAGATACTTCATAGACCCCAAGACAGCACAGAAGTTGAATTTTGTATATCCTAATGATAAGGACAGTGTGGAGCTCATGAACTCACTCTTCGACGTAGAAAATCTTCCTAGTGAGTATGGGGGAAAAGCTACTCTAAAATATGATCATGAAGAGTTCTCAAGATTGATGCTTGAGGACGATGTGAAAACTGCCCAGTTTTGGGGCCTTGATGAGAAGTCACACCACACTAACAATGGTCAATCTGGGGGAGAGGTTGCATCATAA 867 0.4198 MFLLRKKSQNELKNDSSCQDAKVSELKAFIGTLALSERSLKYCTDGCLRRYLEARNWDLHKSKKMLLDSLNWRSSFKPEEIRWSDVAHEGETGKVFRANLHDRVGRTVLIMKPGMHKNTTAPEDGTKYFVYLMENAVLNLPEGQEKMTWLLDFDGFSLRTNIPIKTSRDIIYILQNHYPERLGVVIFYNPPRIFEAFFKAVRYFIDPKTAQKLNFVYPNDKDSVELMNSLFDVENLPSEYGGKATLKYDHEEFSRLMLEDDVKTAQFWGLDEKSHHTNNGQSGGEVAS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00797 288 Pfam CRAL/TRIO, N-terminal domain 27 68 IPR011074 -
Aip05g00797 288 CDD SEC14 91 243 IPR001251 -
Aip05g00797 288 Pfam CRAL/TRIO domain 101 242 IPR001251 -
Aip05g00797 288 SUPERFAMILY CRAL/TRIO N-terminal domain 5 85 IPR036273 -
Aip05g00797 288 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 83 248 IPR001251 -
Aip05g00797 288 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 6 287 - -
Aip05g00797 288 SMART CRAL_TRIO_N_2 44 69 IPR011074 -
Aip05g00797 288 Gene3D - 2 280 IPR036865 -
Aip05g00797 288 PANTHER GH16843P 6 287 - -
Aip05g00797 288 SMART sec14_4 89 245 IPR001251 -
Aip05g00797 288 SUPERFAMILY CRAL/TRIO domain 83 262 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00797 Aip-Chr5 10500120 10502709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00797 48 237 Acyl Lipid Metabolism Gene Families AT1G55840 25.121 2.55e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00797 - - cpap:110822131 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00797 05 10500120 10502709 Aip05g00797 05 10500120 10502709 ECH