Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00785 ATGGATGAGATCTGGGAGAGGGCCGTGGAGACGGCTCTTGACGGAGAGACAGACCACGCCTCCGCTAGGTCTTTAACCCTAGACGGCGCCGTCAAGTGCGTTCAGGGACGGTTACCGCCACCGAGTCTTCTGGAGAGGTTCCAGAACCTTCAGCACCTGTCAATAGCTAACATAGGCGTTTCGTCGCTGGAGCAGTTTCCGCGGCTCCTGAATCTGCAGAAACTAATCCTCTCCGACAACAGAATCGCCGGCGGGCTTGAATTTCTGGTACAGGCTGGCCTCGACTCCCTTCGCGACCTCGATCTGTCTAACAACCGGATTCAGTACATTGAGGATCTAGCTCCTCTCGCGCAGCTGAAGCTCGTTTCGCTGGATCTGTACGAGTGCCCCGTCACGCGCGTCAAGGATTATCGATCTAGGGTTTTCGGGCTCATAAAATCGCTTAAGTACTTGGATAAGATGGATGCGGAGGAGAACGAGAGGCCTGAATCGGATGATGAAGAAGAGGAGGATGAAGAGGAGGAGGATGATCCTGGGAGTGGGGAAATTGACGGTGAGGATCGTCCCTTTGTGACTAGCAACGGGCACAGCGAGGGTGCTGATGGGGTTGTGGATGTTGACGATGACGAGGAGAGTGAGGCTGACGAGGAAGAGGCTGAGACGTCGAGAAGGGAGAACGGTGGGTCGACTCGCCAGGCGAATGGGTTCAGGGTTGAGCCTGTTGTGGGGGATGATGTGGAGGAAGATGATGAAGAGGATAATGAGTCCGGAGAGGAGATAGATGAGGATGATGGGGACGATGATGATGTTGTTGAGGTGCATGAGATTGAAGACAGCGATGATGAAGATGGGGTTGAGTATGATGAAGATGATGACGATGACGATGATGATGAGGATGAGGAAGAGGAGGAAGTTGACAATGATGAAGGAGAGTTTGCAGAGCCAGAGAGTACTGGGAGGTTGGAGAGCACCGAAGGGGAGATTGACGGGCATGAACAGGGGGAGGAAGATGGGGATGAAGATGACAATGGAGAGACTGGGGAAGATGAGATGGGCGTGGAATATGATGGAGAGTATGAAGATGATGATGAAGAAGAGGACTATGGCGCTGGGTATTTTGTTCAGCCAGTCGGACAGGCTGAAGCTGTCAATGCTGGGGATGGGTCAGTGAATGGAGGTAACGATGATGGTGAGGAGGAGGAGGAAGTTGATGATGATGATGATGCTCAGGTATTGCCTTCCAATTCACACCTCAAGAGGAAGCGTGATGATGAAGATGATGATGATGATGAGGACGATGATGAACAATGA 1311 0.5225 MDEIWERAVETALDGETDHASARSLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANIGVSSLEQFPRLLNLQKLILSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQLKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEEDEEEEDDPGSGEIDGEDRPFVTSNGHSEGADGVVDVDDDEESEADEEEAETSRRENGGSTRQANGFRVEPVVGDDVEEDDEEDNESGEEIDEDDGDDDDVVEVHEIEDSDDEDGVEYDEDDDDDDDDEDEEEEEVDNDEGEFAEPESTGRLESTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEYDGEYEDDDEEEDYGAGYFVQPVGQAEAVNAGDGSVNGGNDDGEEEEEVDDDDDAQVLPSNSHLKRKRDDEDDDDDEDDDEQ 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00785 436 MobiDBLite consensus disorder prediction 243 312 - -
Aip05g00785 436 MobiDBLite consensus disorder prediction 203 218 - -
Aip05g00785 436 MobiDBLite consensus disorder prediction 155 436 - -
Aip05g00785 436 Gene3D Ribonuclease Inhibitor 5 170 IPR032675 -
Aip05g00785 436 MobiDBLite consensus disorder prediction 159 182 - -
Aip05g00785 436 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 6 433 IPR045081 -
Aip05g00785 436 MobiDBLite consensus disorder prediction 393 409 - -
Aip05g00785 436 ProSiteProfiles Leucine-rich repeat profile. 96 117 IPR001611 GO:0005515
Aip05g00785 436 MobiDBLite consensus disorder prediction 410 424 - -
Aip05g00785 436 MobiDBLite consensus disorder prediction 329 369 - -
Aip05g00785 436 MobiDBLite consensus disorder prediction 313 328 - -
Aip05g00785 436 SUPERFAMILY L domain-like 40 156 - -
Aip05g00785 436 SMART LRR_sd22_2 69 88 - -
Aip05g00785 436 SMART LRR_sd22_2 94 115 - -
Aip05g00785 436 Pfam Leucine-rich repeat 58 165 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00785 - - tcc:18610955 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00785 05 10231011 10235442 Aip05g00785 05 10231011 10235442 ECH