Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00784 ATGAAGTGTCCATTCTGCTCGGCTACGCAGGGGCGGTGCGCCACCACGAGCTCCGGTCGATCGATCACGGAGTGCACGTCATGCGGGCGCGTGGTGGAGGAGCGGCACTCCCACCCACACCACCTGTTCCACGTGCGGGCCCAGGATAACCCTCTATGCCTCGTGACCTCTGATCTCCCCAACCCCGAACCCTCTCCAATCACCAAGGACGACGATCCTTTCGAGCCCACGGGCTTCATAACCGCCTTCTCCACCTGGTCCCTTGAACCCATCCCCCTCTACCTCCAGTCCTCTCTCTCATTCTCCGGCCACCTCGCGGAGCTCGAGCGCACTCTCGAATCCACCTCCTCCTCATCGTCGTCGTCGTCTTCTTCTTCTTCGACGGTTGTGGTGGATAATTTAAGGGCGTACATGCAGATTATCGATGTGGCCTCCATACTTGGCTTAGACTGCGATATTTCCGACCACGCTTTTCAGCTGTTCAGGGATTGTTGCTCGGCTACTTGCCTCAGAAACCGTAGCGTTGAGGCTCTTGCTACTGCCGCTCTTGTTCAAGCCATTCGAGAGGCCCAAGAGCCTCGAACCCTTCAGGAAATTTCAATAGCAGCTAATGTACCACAAAAGGAAATTGGGAAGTATATGAAGATTCTGGGAGAAGCTTTACAGCTAAGTCAACCTATTAACAGCAATTCCATATCAGTCCATATGCCAAGATTTTGCACGCTCCTACAGCTCAACAAATCTGCTCAGGAACTGGCTACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACTCGTAGGAATCCAATTAGCATTTCAGCTGCTGCTATATATTTGGCTTGCCAACTCGAAGACAAACGTAAAACTCAGGCTGAAATTTGCAAGGTAACTGGCCTTACTGAAGTCACTCTACGTAAAGTGTACAAGGAACTACTGGAGAATTGGGATGATTTGCTTCCATCAAATTACACCCCGGCTGTGCCTCCAGAGAGAGCATTTCCCATGACCGTAATTGCTTCTGGTCGCTCCACAACAGCTAAGGTTGATGCAATAGAGGCCACTTTGGACACAGAGAAGTTGCCAGAAATCAAACCTAACAAACCGACTGAGGTCTCAGTCACTGTGCAACAGCCCAGAGGGAAGGATGAGGCCGAAGTTAAAAGCAATGCCCGTGCCGCCAACCATCCCACACAGAATCAACAGTCAACTTATTGGCAATCCCAGCTTCCCAGTGGGACAAACAGTCATCCTAATGTTTTGCAAGGAATGGATATCGACAGATCAGAGAGTAACCACCCCCACACTGAAAAGATGGCAGAGGACACAAATGGCACTGCCAGTGCCAATTCTCTAAACCCAAGCCAACTTTACAGTCCTCCTGGTTCAAGTGCAAGCTCTGTTATGAGGCAGTTTTCAGCTTCCCCTTCATCTGGACACGTGAATGTTCGATTAGCGCAGTCACCTAAGACAATGCCAGGTTATCCGGAGAACTGA 1500 0.5067 MKCPFCSATQGRCATTSSGRSITECTSCGRVVEERHSHPHHLFHVRAQDNPLCLVTSDLPNPEPSPITKDDDPFEPTGFITAFSTWSLEPIPLYLQSSLSFSGHLAELERTLESTSSSSSSSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYMKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPMTVIASGRSTTAKVDAIEATLDTEKLPEIKPNKPTEVSVTVQQPRGKDEAEVKSNARAANHPTQNQQSTYWQSQLPSGTNSHPNVLQGMDIDRSESNHPHTEKMAEDTNGTASANSLNPSQLYSPPGSSASSVMRQFSASPSSGHVNVRLAQSPKTMPGYPEN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00784 499 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 496 IPR000812 GO:0006352|GO:0070897
Aip05g00784 499 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Aip05g00784 499 PRINTS Transcription initiation factor IIB signature 180 199 IPR000812 GO:0006352|GO:0070897
Aip05g00784 499 PRINTS Transcription initiation factor IIB signature 206 221 IPR000812 GO:0006352|GO:0070897
Aip05g00784 499 PRINTS Transcription initiation factor IIB signature 235 253 IPR000812 GO:0006352|GO:0070897
Aip05g00784 499 PRINTS Transcription initiation factor IIB signature 269 285 IPR000812 GO:0006352|GO:0070897
Aip05g00784 499 PRINTS Transcription initiation factor IIB signature 301 315 IPR000812 GO:0006352|GO:0070897
Aip05g00784 499 Gene3D - 234 330 - -
Aip05g00784 499 MobiDBLite consensus disorder prediction 393 427 - -
Aip05g00784 499 SUPERFAMILY Cyclin-like 232 330 IPR036915 -
Aip05g00784 499 CDD CYCLIN 136 217 IPR013763 -
Aip05g00784 499 MobiDBLite consensus disorder prediction 442 486 - -
Aip05g00784 499 Pfam Transcription factor TFIIB repeat 136 217 IPR013150 GO:0017025
Aip05g00784 499 Pfam Transcription factor TFIIB repeat 234 315 IPR013150 GO:0017025
Aip05g00784 499 SUPERFAMILY Cyclin-like 135 225 IPR036915 -
Aip05g00784 499 MobiDBLite consensus disorder prediction 361 499 - -
Aip05g00784 499 SMART cyclin_7 138 219 IPR013763 -
Aip05g00784 499 SMART cyclin_7 234 315 IPR013763 -
Aip05g00784 499 Gene3D - 134 225 - -
Aip05g00784 499 CDD CYCLIN 236 314 IPR013763 -
Aip05g00784 499 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 496 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00784 K03124 - gmx:102662353 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00784 05 10205648 10208554 Aip05g00784 05 10205648 10208554 ECH