Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00781 ATGGAGCGGGGTGGTGGTGGAGACGAAGGCCAGTTCAACAAATATGCTTTGGCTTGTGCTGTGGTTGCTTCCATGGTGTCCATCATATTTGGTTATGATACGGGTGTTATGAGTGGAGCCATGATTTTCATCAAAGAAGAACTCGGAATCAGCGACACACAACAGGAAGTCCTCGCCGGAATCCTCAACATATGCGCATTGGTTGGCTCCTTAGCCGCCGGAAGAATCTCCGATTACGTTGGTCGACGCTATACAATCTCCATGGCCTCCATCCTCTTCATGCTTGGTGCAATCCTCATGGGCTACGGCCCAAACTACGCAATTTTAATGACTGGAAGGTGCGTCGCCGGCGTTGGCGTGGGTTTCGCACTCATGATAGCACCCGTTTACTCTGCAGAAATCTCCTCCGCCAAATCCCGCGGCCTTCTAACCTCCCTCCCCGAACTTTGCATCGGTATCGGAATCTTACTTGGCTACATACTAAACTACGTATTCGGGAAATTCTTGCCATTGAAGCTTGGTTGGAGATTGATGCTTGGTGTAGCCGCAGTTCCTTCACTCGCCTTAGCTATAGGGATTCTCTTCATGCCAGAATCCCCAAGGTGGCTTGTGATGCGTGGCCATCTACCAAAGGCAAAGAAAGTTCTGCTGAAAATTTCGAACACCGAACAAGAAGCAGAGAATCGGTTCAATGATATAAAGCTCGCAGCAGGTATTGGTGATGAAAATAACTCTTTAGCAGCTAAGGAAAACCAAAATGGCAAAAGCGTTTGGAAAGAGTTGTTGTTGCATCCTTCTCCTCCGGTTCGGTGGATGCTCATTACGGCGGTTGGGATTCACTTCTTCGAACACGCCACTGGGATCGAGGCGGTTATGTTATACAGTCCAAGAATCTTCAGGAAAGCCGGTGTTACGAGCAAGGAGCATCTTCTACTAGCGACGATCGGGGTTGGACTCACGAAGATTACTTTCTTGGTGATAGCGTCGTTCTTGCTTGACAGAGTTGGGAGGAGGAAGCTCTTGCTGGTAAGCCTCGGCGGCATGGTTTGTGCGCTTGCGGTGTTAGGGTTCAGCTTAACAATGGTGGAGGGATCCCCCGAGCAGAGGCTCGCGTGGGGTTTGACACTAAGCATAGTTGCTACTTACACCTTTGTTGCGTTCTTTAACATTGGGCTTGGGCCTGTGACGTGGGTCTATAGCTCAGAGATATTTCCCTTGAGACTGAGGGCCCAAGGGGCCAGTATTGGTGTTGCGGTGAATAGAGTGATGAATGCTACGGTTTCTATGAGCTTTATTTCGATCTACAAGGCCATTACTATAGGGGGAGCGTTTTTCATGTTTTCTGGAATATCTATAGTGGCTTGGTTGTTCTTCTTTTTCTTGATGCCTGAGACCAAGGGTAAGGCCTTGGAAGAAATGGAGATGGTTTTCACCAGAAAAAGTCATAGAGATGTTGCTGCTGCTGGAACTCAAAATAATACGAGATAG 1488 0.4839 MERGGGGDEGQFNKYALACAVVASMVSIIFGYDTGVMSGAMIFIKEELGISDTQQEVLAGILNICALVGSLAAGRISDYVGRRYTISMASILFMLGAILMGYGPNYAILMTGRCVAGVGVGFALMIAPVYSAEISSAKSRGLLTSLPELCIGIGILLGYILNYVFGKFLPLKLGWRLMLGVAAVPSLALAIGILFMPESPRWLVMRGHLPKAKKVLLKISNTEQEAENRFNDIKLAAGIGDENNSLAAKENQNGKSVWKELLLHPSPPVRWMLITAVGIHFFEHATGIEAVMLYSPRIFRKAGVTSKEHLLLATIGVGLTKITFLVIASFLLDRVGRRKLLLVSLGGMVCALAVLGFSLTMVEGSPEQRLAWGLTLSIVATYTFVAFFNIGLGPVTWVYSSEIFPLRLRAQGASIGVAVNRVMNATVSMSFISIYKAITIGGAFFMFSGISIVAWLFFFFLMPETKGKALEEMEMVFTRKSHRDVAAAGTQNNTR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00781 495 ProSitePatterns Sugar transport proteins signature 1. 328 344 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip05g00781 495 PRINTS Sugar transporter signature 27 37 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00781 495 PRINTS Sugar transporter signature 110 129 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00781 495 PRINTS Sugar transporter signature 283 293 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00781 495 PRINTS Sugar transporter signature 378 399 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00781 495 PRINTS Sugar transporter signature 401 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00781 495 ProSiteProfiles Major facilitator superfamily (MFS) profile. 19 466 IPR020846 GO:0022857
Aip05g00781 495 ProSitePatterns Sugar transport proteins signature 2. 115 140 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip05g00781 495 TIGRFAM SP: MFS transporter, sugar porter (SP) family 14 473 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00781 495 Gene3D MFS general substrate transporter like domains 8 482 IPR036259 -
Aip05g00781 495 PANTHER POLYOL TRANSPORTER 3-RELATED 9 484 - -
Aip05g00781 495 SUPERFAMILY MFS general substrate transporter 12 474 IPR036259 -
Aip05g00781 495 Pfam Sugar (and other) transporter 19 477 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip05g00781 495 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 9 484 IPR045262 GO:0015144
Aip05g00781 495 ProSitePatterns Sugar transport proteins signature 1. 73 90 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00781 Aip-Chr5 10183572 10186498 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00781 13 483 Organic Solute Cotransporters AT4G36670 67.579 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00781 - - gmx:102661233 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00781 05 10183572 10186498 Aip05g00781 05 10183572 10186498 ECH