Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00777 ATGGACATAGACGAGGTCGAAGCCACGGGCAAACTCCCTTCTCGAGTCACCAAATTCGCGCCAAAATCCTCCAAGCCTAAAACCAAACCTAAACCCCCATCCGAACCTCACCTACAACCTAAACCTGAACCCCAACCACCACCCCCCTTCAAACCAGAGCCACAGGAATTCGCAGCCAAGAAGGAAGATGTTGACGAAATTGTCGCACCACCAACTCACACGAAGCCCGAGCCCAACCACACCGCCAATACCGAGCTGGCACCCAAGTCCGAGGCCCAAGATGAAACGGACCAAGTCGATTCCATGTCCCTGGATCTTCCGGAAGAAACCGCCGAGGACACCGTCGTTCGCGAATTCGACGTCTTCTTTGGTCCTTCTGTCGATGCTGCCACTCAGTTATACGTTTTGCAATATCCGTTGAGACCGCGCTGGCGGCCATATGAGCTAGAGGAACGATGCGAAGAGGTAAGGTTGAATCCTAAGAGTTCAAACATGGAGATTGATTTATCTGTTGATTTGGACTCAAGTAATATTGACACTGAGACTGCTAGCAGATTCAACTTCACTAAGCAGACTTTAGCAACTAAGTGGAATCCATCTTCTGCAAACTGCTATGCTGTTGGACTTCTCAAGGGTGATAAGTTCCAACTGCATCCAGTTAATGCAGTTGTGCAGCTTCGACCAGCATTTCATCACCTACATTCTGGTGGTTCAAAAAGAAAGAACCAGGTCTCCACTGGGGAAAATGCCACTGTCAAAATTGAGGGGTCAATTGAAGAAAAATCTGCTGCTGCACCAAAAAAGCAGAATAAGCAGACGGAGTTATCACTTGGGCAACAGAGTGATGACGATGAGGGCTGGGTTGCTCTCAAGTACCATAGCTGCAAGAGTGATATCTCCTCTCGATATTTAGATAAAATGATGATGCACGAAAGTCATCCCATTAAATTTACAATGGATGTTGATGACTATGTAACTGCACTATGTCCTGGAGTGAACAACATCTCTTCTAAAAGGCATCTTTTATCATTGCCCGTGGAAGAACGTCTTAAGAAATTGCTTGTTGAGGACCCTCCATTTCGCCGATTCAGTGCTATTAAGCATTTTGCTCGCGAGTACTCGGATGAGGAACTTGCGGAATTCCTGCACAAGCACGCAATATTAATCCAGGGGTTCTGGACTGCTAAAAGTAAATTGCTTTCTCATAAGGATGATTCTGGTATTGGAGAATTAGCTAGAGACTTCGTCATACTATTGTTTAGCAAGAGTTTGAGAGTTCAGGCTTCAGATCTGAATCTGGGAGGCAAAGTTGGTAATGCTTTAAAAGAATGGCTGAATAAATTTGGTTTGGAAGGATGTGATCCACTTAAATCTGGCGGAACTCTTTATTGGAAGTTCCCAGAGGTTCCTGATGATTCATTTAAAAAACGTCATCCAAATATTGCGGAAAGACAAGAGGAAATGTTGAAAAATTTGGAAGCAAAACTATCTGATTTTGGAAGGCGTGTTATTGTTGCAAAGCGGAAGTTTGATAAAGATGGTGTAGCAAGCCAACACGTCAAGAGTGAGCTTGTCAAATCAGCAAAGTCTGAGCAGGTAACTAGTTTGAGCGGAGCGTCTTGTGGGAGGATGACCATGTCAAATGCAACCAGACAAGCACTGCTAGTTGCCATCACAAAACTTCTACAGACTCACAGAGTCTGCAGCCTCCAAATGATGCGTCAAAGATTACGTGAAATGGCAATCTCCACAAGTCTTCTTTCAAAGACAGAATCAAAAGTTGCTAGTGATGCAATGGTTGGTTTTGAGGGTCCACAAGAAGAGCTGAAGGCTGTCGTAAGCGAAGTTGCATATGATATCCACGGTTCTTATGTTCTGAAAGTACAGGATGACCCATTTAGAGATGTTGTAATCACATTGCTTCGTGGAAAATCTGATGGCAAGTTGAAGAAGGCTGAAATATGTGCAGCTGCAACAGCAACACTTAATAGAGAAGTCACAAGCAATGAATATACCAGGGTCATGAGTGAGCTGTGTGTCTCAAAAGGTTCTTATTGGCATTTGAAAAGCGGTGATGGAAGTATGCAATGA 2091 0.4433 MDIDEVEATGKLPSRVTKFAPKSSKPKTKPKPPSEPHLQPKPEPQPPPPFKPEPQEFAAKKEDVDEIVAPPTHTKPEPNHTANTELAPKSEAQDETDQVDSMSLDLPEETAEDTVVREFDVFFGPSVDAATQLYVLQYPLRPRWRPYELEERCEEVRLNPKSSNMEIDLSVDLDSSNIDTETASRFNFTKQTLATKWNPSSANCYAVGLLKGDKFQLHPVNAVVQLRPAFHHLHSGGSKRKNQVSTGENATVKIEGSIEEKSAAAPKKQNKQTELSLGQQSDDDEGWVALKYHSCKSDISSRYLDKMMMHESHPIKFTMDVDDYVTALCPGVNNISSKRHLLSLPVEERLKKLLVEDPPFRRFSAIKHFAREYSDEELAEFLHKHAILIQGFWTAKSKLLSHKDDSGIGELARDFVILLFSKSLRVQASDLNLGGKVGNALKEWLNKFGLEGCDPLKSGGTLYWKFPEVPDDSFKKRHPNIAERQEEMLKNLEAKLSDFGRRVIVAKRKFDKDGVASQHVKSELVKSAKSEQVTSLSGASCGRMTMSNATRQALLVAITKLLQTHRVCSLQMMRQRLREMAISTSLLSKTESKVASDAMVGFEGPQEELKAVVSEVAYDIHGSYVLKVQDDPFRDVVITLLRGKSDGKLKKAEICAAATATLNREVTSNEYTRVMSELCVSKGSYWHLKSGDGSMQ 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00777 696 MobiDBLite consensus disorder prediction 256 279 - -
Aip05g00777 696 Coils Coil 482 502 - -
Aip05g00777 696 MobiDBLite consensus disorder prediction 1 101 - -
Aip05g00777 696 PANTHER DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5 109 487 IPR006886 GO:0005634|GO:0006351
Aip05g00777 696 Pfam RPC5 protein 112 497 IPR006886 GO:0005634|GO:0006351
Aip05g00777 696 MobiDBLite consensus disorder prediction 55 70 - -
Aip05g00777 696 MobiDBLite consensus disorder prediction 37 54 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00777 K14721 - gmx:100780965 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00777 05 10108167 10115448 Aip05g00777 05 10108167 10115448 ECH