Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00775 ATGCTATCTGGCATTCTCTCAAAGGTGAACACTACCATTTACTGTCAACGCATTCAGGAAGCAATTACACGGCAACAAGCAGTGCCAACACCATTATTGTACAGGAATCCAGTTCTGTCTCTTTCTTCAGGCCACAAGGTTTATAGAAAATCAATGGCTACTTCACCTTCCAAAGCTGTGCTTGGAGATGTTTATGTTGATGACTTGGTCTCCAGTTGCAGCAGTGGTGTGGATTTCACAAAGCCTGCTGGTGTGTACTTCAAGGACAGGACTCAGAGAGGGTGCTTGAGAGCTAGTGTGAATTTAAGGAGGCCACAGATTTTGTGTGGTTCTCTAAGTTTTGGGTGCTCCTCTGCCTTTGATTCCGATTGGAGGAGCCGGAATTCAGGTTCGCTTCATGGACCATGGTTGAAGAGTTTCTGTTCCTCGTCTTCTACTTCCTGCTCGGCTGGTGCTCCACATGGTGTTTCATTTGAGGGAAGCCAACCTGAAGAACAGCTTGCAACTTCTACCATATCTCCTGAATATGGAAAGACATTGAAGATGATTTCAGGATCATGTTACCTACCTCACCCAGATAAGGAGGAGACAGGGGGAGAGGATGCTCATTTCATTTGCAGAGAAGAACAAGCGATTGGTGTTGCAGATGGTGTTGGTGGCTGGGCAGACGTTGGTGTTAATGCGGGGCTCTTTGCCCAGGAGCTTATATCCAATTCAGTGAGAGCAATTCAAGAGGAGCCTAAAGGTTCCTTTGATCCAAAAAGGGTGTTAGAGAAGGCTCATTCATGTACCAAGTCTAAGGGTTCATCAACAGCTTGTATCATTGCCCTTACTGATAAGGGATTACATGCTATCAATTTAGGTGACAGTGGATTCATTGTGGTTAGAGATGGTAGCACCATTTTCAGGTCCCCTGTTCAACAGCATGACTTCAATTTCACATATCAATTGGAGAGTGGCAATGGTGGTGACCTACCTAGCTCTGCTGAGGTTTTTGTAATACCTGTGGCCCCAGGAGATGTCATAGTTGCTGGAACAGATGGGTTATTTGACAACTTGTACAACAATGAGATCAGTGCAGTGGTTGTGCATGCGGTTAGAGCGGGACTAGAACCGCAAGTAACCGCTCAGAGGATAGCGGCACTAGCTCGCGAGCGAGCACTCGACAAGACTAGGCTGTCGCCGTTTGCTGCTGCTGCTCAGGAGGCTGGATTCCGATACTATGGCGTGGCCAGGCCTGCATGTCAATTTTGA 1254 0.4705 MLSGILSKVNTTIYCQRIQEAITRQQAVPTPLLYRNPVLSLSSGHKVYRKSMATSPSKAVLGDVYVDDLVSSCSSGVDFTKPAGVYFKDRTQRGCLRASVNLRRPQILCGSLSFGCSSAFDSDWRSRNSGSLHGPWLKSFCSSSSTSCSAGAPHGVSFEGSQPEEQLATSTISPEYGKTLKMISGSCYLPHPDKEETGGEDAHFICREEQAIGVADGVGGWADVGVNAGLFAQELISNSVRAIQEEPKGSFDPKRVLEKAHSCTKSKGSSTACIIALTDKGLHAINLGDSGFIVVRDGSTIFRSPVQQHDFNFTYQLESGNGGDLPSSAEVFVIPVAPGDVIVAGTDGLFDNLYNNEISAVVVHAVRAGLEPQVTAQRIAALARERALDKTRLSPFAAAAQEAGFRYYGVARPACQF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00775 417 SMART PP2C_4 173 391 IPR001932 -
Aip05g00775 417 ProSiteProfiles PPM-type phosphatase domain profile. 183 417 IPR001932 -
Aip05g00775 417 SUPERFAMILY PP2C-like 186 386 IPR036457 -
Aip05g00775 417 SMART PP2C_SIG_2 196 393 IPR001932 -
Aip05g00775 417 Pfam Protein phosphatase 2C 201 367 - -
Aip05g00775 417 PANTHER PROTEIN PHOSPHATASE 36 409 - -
Aip05g00775 417 Gene3D - 187 391 IPR036457 -
Aip05g00775 417 PANTHER PROTEIN PHOSPHATASE 2C 36 409 IPR039123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00775 Aip-Chr5 10057081 10060332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00775 K17508 - gmx:100785804 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00775 05 10057081 10060332 Aip05g00775 05 10057081 10060332 ECH
Aip05g00775 05 10057081 10060332 Aip07g02581 07 107376412 107380598 ECH