Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00774 ATGGAGCTTCGCAAAGCCATCTTAGCCTTCGTGTTGATCTTGGTTCTTTCCTTATTGTATGGCGGGGTTAAGGCATTGAGTAGAAGGGACTACTCTTTGGTAGAGAAGAGTGAGAGGATACCTTTAGTTGTTTCTGAATATGGAACGGTCTCCGCCGTTGATGTCCAAGCCGGGCATGGTGCACCCTTACACCATCTTCAGTTCATCACATTGGAACCTAACTCTCTCTTCCTTCCCGTCCTTCTCCATGCGGATATGCTCTTATATGTCCACACAGGGAGTGGAAGATTGACTAGCGCAGATGAAGATGGAACAAAGAGCATTGATTTACGTGTAGGAGATCTGTGCAAGCTGGATGAAGGAACTGTTTTTCATATACAGAGCAACTCTGATGAACTTAGCCTCTATGCCATGTTTGCCAATTCAGACGATCACACTTATGATCCTTCAATCGGTGCTTACTCAAGGGTCAACGAACTCATCAAAGGCTTTGACAAGAGAATCATTCAAGCAGCATTTAAGGTTTCGGAGGATTTGGTTGAGGCGATCACAAAGAAGAGCAGCATCCCAGGTATCGTGCATAGCAAGAATGCGACTTCAGAGGAGCAGCATGCTCCAAAGGATGATAGTTATACTCCAGAGATAGACCTGGAGGCTTCTCTTCTTGGAAACATTTTAGGGATTCATAGCAGCAACAAAGAGAAAACCAAATACAACATCTTTAAACATGACCCTGATTTCAGAAACCGCCACGGTTGGACCCTAACCGTCACTAAAAAGCAGCTCAAAGCATTGAAGCACACCAACCTTGGATTTCTCATGGTCAATTTGACTGCGGGATCAATGTTGGGACCACATTGGAACCCAAGGTCTGCAGAAATAGCAGTGGTGTTGTACGGACGAGGCATGGTTCGTGTGTTATGTGGAAGCAGCAGCAATGATGATGTTGATAAGCAGAGAAGGAGGAGAGAATGCAAGAATAGGAGGTTTAAGGTTGAGGAAGGTGAGGTGTTTGTGGTGCCTAGGTATCATGCAATGGCTCAGATGTCGTTCCAGAATGAGTCACTGGTGTTTCTGGGGTTCACCACAAGTTCTAAAAAGCATACCAATGTTCGTTTCTTGGCTGGAGACACGTCCGTGCTTCAAAACATGAACAGAGATGTATTGGCCACCTCTCTTGGCGTCAGTAACGCCACCGTTGGCAGGCTTCTTCGTAATCAGAACGAGTCTGTGATATTCGCCTGTAATTCTTGTGCGGAGGAAGAGAGAAGAAGAGAGGAGGAAGAGGATGCAAGAGAGAAGGAGAGAGAAGAAGAAGAAGAAGAAGAAGAGAAGGAAAGGAAGCGACAAGAGGAGGAGGAGGAGGAAGCAAGGAGAAGGGAAGAGGAAGAAGCAGCTAGGAGAAGGGAAGAGGAAGAGAGGGAGAGGGCTGAAGAGGAAGAGAGAAGAAGAGAGGAGGAGAAGGAGAAGGAGGAAGAGGATGCAAGAGAGAAGGAGAGAGAAGAAGAAGAGAGGGAAAGGAAGCGACAAGAGGAGGAGGAGGAAGCAAGGAGAAGAGAAGAGGAAGAGAAAGAGAGGGAAAGGAAGCGACAAGAGGAGGAGGAGGAGGAGGAAGCAAGAAGAGAGAGAGAAAGGAGAAGAGAAGAGGAAGAAAGGAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGGGGATCAGAGGCAGAGAGAGCTCAAGAGGAAGCTAGAAAAGAGAGGCAAAGAAGAGAAGAAGAAGAAGAGATAGAAAGGGAGAGACAAGAGGAAGAAAGGAGAAGGGAGTTCGAAAGGAGAAGACAAGAAGCTGCTGAGAGGGAAAGACAAGAAGAAGGAGGAGGACGAAGACAGCAGGAAGAGAGGGAGGGAAAGCGCCAAGATGGCGGTGGTGGTGGTGGTGGTTATCATGTTCCAGTGGAAACACAAGTAGAAGGAAGGAGAGTCTTGAAGGCACGCCATGTCTGA 1980 0.4707 MELRKAILAFVLILVLSLLYGGVKALSRRDYSLVEKSERIPLVVSEYGTVSAVDVQAGHGAPLHHLQFITLEPNSLFLPVLLHADMLLYVHTGSGRLTSADEDGTKSIDLRVGDLCKLDEGTVFHIQSNSDELSLYAMFANSDDHTYDPSIGAYSRVNELIKGFDKRIIQAAFKVSEDLVEAITKKSSIPGIVHSKNATSEEQHAPKDDSYTPEIDLEASLLGNILGIHSSNKEKTKYNIFKHDPDFRNRHGWTLTVTKKQLKALKHTNLGFLMVNLTAGSMLGPHWNPRSAEIAVVLYGRGMVRVLCGSSSNDDVDKQRRRRECKNRRFKVEEGEVFVVPRYHAMAQMSFQNESLVFLGFTTSSKKHTNVRFLAGDTSVLQNMNRDVLATSLGVSNATVGRLLRNQNESVIFACNSCAEEERRREEEEDAREKEREEEEEEEEKERKRQEEEEEEARRREEEEAARRREEEERERAEEEERRREEEKEKEEEDAREKEREEEERERKRQEEEEEARRREEEEKERERKRQEEEEEEEARRERERRREEEERRREEEEEEEEERGSEAERAQEEARKERQRREEEEEIERERQEEERRREFERRRQEAAERERQEEGGGRRQQEEREGKRQDGGGGGGGYHVPVETQVEGRRVLKARHV 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00774 659 Gene3D Jelly Rolls 230 415 IPR014710 -
Aip05g00774 659 MobiDBLite consensus disorder prediction 432 449 - -
Aip05g00774 659 SMART Cupin_1_3 31 181 IPR006045 -
Aip05g00774 659 SMART Cupin_1_3 238 401 IPR006045 -
Aip05g00774 659 Coils Coil 416 612 - -
Aip05g00774 659 MobiDBLite consensus disorder prediction 450 553 - -
Aip05g00774 659 Pfam Cupin 43 178 IPR006045 -
Aip05g00774 659 Pfam Cupin 238 399 IPR006045 -
Aip05g00774 659 PANTHER PREPROMP73 29 464 - -
Aip05g00774 659 CDD cupin_7S_vicilin-like_N 42 211 - -
Aip05g00774 659 MobiDBLite consensus disorder prediction 419 659 - -
Aip05g00774 659 PANTHER OS03G0336100 PROTEIN-RELATED 29 464 - -
Aip05g00774 659 MobiDBLite consensus disorder prediction 568 632 - -
Aip05g00774 659 Gene3D Jelly Rolls 29 205 IPR014710 -
Aip05g00774 659 SUPERFAMILY RmlC-like cupins 40 411 IPR011051 -
Aip05g00774 659 CDD cupin_7S_vicilin-like_C 245 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00774 Aip-Chr5 10053604 10056446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00774 33 438 Miscellaneous Gene Families AT4G36700 41.667 5.66e-101 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00774 - - ahf:112800675 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00774 05 10053604 10056446 Aip05g00774 05 10053604 10056446 ECH