Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00746 ATGTCGCAGTCTTACTGCATGACGGAGGGGAAATCATACGCATGCGTGGGTTGGGTTGAGAAATACTTCAACGATTGTCTTTGTAATATTAAAGATGAGATATCATTCGGGTTTGGTTTCATGAGTCTAATATGTTGGGGTGTAGCAGACATTCCTCAGATAATAACCAATTTTCACACTAAGTCAAGCCATGGAGTCTCCCTAGCCTTTCTCCTCACTTGGGTTGCAGGTGATATATTCAACCTCGTGGGTTGTCTCCTGGAGCCAGCTACGTTGCCCACACAATACTACACAGCTCTGCTTTACACAGTGACAACAATCGTATTAGTTGTGCAAAGCTTGTACTATGACTATATCTATAGATGGCGAATGCGTCATCGTCAGAAGATGAACAACGACAAGGTGGATGAAGAAGAGAAGAAAGCAGGGCACGACTGTGGGATTTCAATAAAACCAAACGGCACAGACATGACCATGAAGGCAACACCGAGAAGAACGCAACCAGAACAACTGTATTATACGTCAGCTCGATCAATGGCTGGAAGTTTTACTCCTCCATTTAGAGGAGGGTACCTGAGCGGCGATGATTGTTGTTCTGATGAGGATGAGGCAGCAGCAACCAGCAGAAGACGCTTCCCTGCTACATGGACATCGATGTCCCTCCCTGTAACAGCATCGCTTAACTTGCCCTTCCTCCACCGGGGTAATGCTTTCAGATTTCATCATGAAAATGAGAATCAGATACGAGAGAGTGCAGTGGTGGGTCAATGCCTAGGCTGGCTCATGGCTGCAATATATATGGGTGGTCGTCTCCCTCAGATTTTCTTGAACATTAAAAGAGGCAGTGTAGAGGGACTAAATCCTCTCATGTTCATCTTTGCACTCATCGCTAATGCCACTTACGTGGGAAGTATTGTTGTACGAAGCAGCGAATGGGAAAGCATCAAAGCAAATATGCCATGGTTGTTGGACGCCATAGTCTGCGTGGCCTTGGACCTATTTATAATATTGCAGTACACCTACTATAGATACTTCCGGAGGCCAACAATTGATCATGAAGCTGATTATGGATTCTACCAAGAAGCCAGAAAAGTTGCCGCAGCCTCTTGA 1110 0.4541 MSQSYCMTEGKSYACVGWVEKYFNDCLCNIKDEISFGFGFMSLICWGVADIPQIITNFHTKSSHGVSLAFLLTWVAGDIFNLVGCLLEPATLPTQYYTALLYTVTTIVLVVQSLYYDYIYRWRMRHRQKMNNDKVDEEEKKAGHDCGISIKPNGTDMTMKATPRRTQPEQLYYTSARSMAGSFTPPFRGGYLSGDDCCSDEDEAAATSRRRFPATWTSMSLPVTASLNLPFLHRGNAFRFHHENENQIRESAVVGQCLGWLMAAIYMGGRLPQIFLNIKRGSVEGLNPLMFIFALIANATYVGSIVVRSSEWESIKANMPWLLDAIVCVALDLFIILQYTYYRYFRRPTIDHEADYGFYQEARKVAAAS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00746 369 Gene3D - 37 135 - -
Aip05g00746 369 Gene3D - 254 350 - -
Aip05g00746 369 PANTHER PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN 1 364 - -
Aip05g00746 369 Pfam PQ loop repeat 255 312 IPR006603 -
Aip05g00746 369 Pfam PQ loop repeat 34 90 IPR006603 -
Aip05g00746 369 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 364 - -
Aip05g00746 369 SMART ctns 48 79 IPR006603 -
Aip05g00746 369 SMART ctns 268 299 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00746 Aip-Chr5 9609685 9612360 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00746 K23678 - gmx:100815310 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00746 05 9609685 9612360 Aip05g00746 05 9609685 9612360 ECH
Aip05g00746 05 9609685 9612360 Aip01g00845 01 15067303 15077351 PCT