Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00719 ATGATGGAGGAAGTGGCAGGGGCGTTTGGCAGCAGCGCCAGCTTCGCCCTCCGCTTGGGGCAGACCGTCTTCTCCTCCGCCTCCCTTCTATTCATGTGCTTTGGCGTCGATTTCTACTCGTACACTGCTTTCTGCTATTTGGTGACAGTCATGGGTTTGGTAATTCCATGGAGCGTAACATTGTTAGTAGTAGATGCTTACTCCGTCTTCATAAAAGACCTACAAATTCAGCAAAGGATTGTAATGATAATCTTTCTGGGAGACATGGTTTTAGCGTATCTCTCGCTGGCTGCAGCATGCTCTACAGCGAGTGTCGCGGATCTTCTGCTTGAAGCTGGTGGATCCCTTTGCCCTGCAAGACTATGTGGTAGATATCAAATGTCTGCTGCTATGGCCTTTTTGTCTTGGTTTCTTTCATCAGCTTCCTGTCTTTTCAATTTTTGGCTCTTCTCTTCTCTGTAA 462 0.474 MMEEVAGAFGSSASFALRLGQTVFSSASLLFMCFGVDFYSYTAFCYLVTVMGLVIPWSVTLLVVDAYSVFIKDLQIQQRIVMIIFLGDMVLAYLSLAAACSTASVADLLLEAGGSLCPARLCGRYQMSAAMAFLSWFLSSASCLFNFWLFSSL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00719 153 PANTHER CASP-LIKE PROTEIN 5B3 2 152 IPR045009 -
Aip05g00719 153 Pfam Casparian strip membrane protein domain 11 138 IPR006702 -
Aip05g00719 153 PANTHER CASP-LIKE PROTEIN 5C1 2 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00719 Aip-Chr5 9120477 9123466 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00719 - - gmx:100819922 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00719 05 9120477 9123466 Aip05g00719 05 9120477 9123466 ECH