Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00541 ATGGATATATTTTACCATCCACACATGGATCGGGAAATTGAATCGCTCATTGAGAGAATACATCCTCCCAGGGTCTGCATAGACAACGATTCTTGCCGAGAATGCACCGTAGTGAAGGTCGATAGTGCAAACAAGCACGGGATATTATTGGAGATGGTCCAGGTGTTGACAGATCTTGATCTTATTATTTCTAGATCATACATTTCCTCTGATGGTGGATGGTTTATGGATGTGTTCCACGTGACCGATCAAGCTGGCAAGAAGCTCACGGACGAAACCCTCATGCTCCACATTCAGCAGAAACTATGTACCACTAGAAGAAAAGGAAATATCTCGAGTGATGAAGATGATGAAACTACGTCAGAACCATATGGTTGCGATGGGCCCCACTCACCCCAAAACACGGCCCTGGAGATGACTGGGCTGGACCGGCCCGGCCTACTATCTGAAATAGCTGCGGTGCTAGCGGAGTTGGGCTGTACCGTGACCTCGGGAATGGCCTGGACCCACAACGACAGAGCGGCCTGCATCATCTACGTAGAAGACGCTTTAAAAGCAGGGCCCATCAAGGACCCAATACGGCTGGGCCACGTTCAAGAGCAGCTTCAGAACGTGGTGGAGGCCCACGGCGATATCGGAGAGAGGAAAAGCGTGAGGCTGAGAAACTTGGCGGCGGGGCGCACCCACACAGAACGGCGGCTCCACCAGCTGATGTACGCGGACAGGGACTACGAGAGCTGCCGTGCGTGTCACGGGGAGAGTAGCGGGGAGCACAAGAAGGGGTGTGATGGGACCCACGTGTCCGTTAGTAGATGCAAGGACAAAGGGTACTGGGTGGTCAACGTGAGGAGCAGGGACCGTCCTAAACTACTCTTTGATACCGTCTGCGTCTTAACCGACTTGCACTATGTGGTGTTCCACGCCGCCATCAGGTCCAAGAGTTCCATGGCCGAGCAGGAGTACTTTATAAAGCACGCCGTCGCTGGCGCTTGTCTGGACGAAGAATCCGAGAGACAAAAGCTCATCTTATGCTTAATCGCTGCCATAGAACGCAGAGTCTCCCATGGATTAAGGGTAGATATTCGCACCAAGAATAGGACGGGTCTACTGTCGAACGTGACAAGGGTGTTCCGTGAGAATGGACTATCGGTATCAAGGGTTGAGATTGGAACACAAGGGGACAATGCGGTGGGATCATTCTTTGTGACAGACTCTTCTGGTCAACAAGTCAACCCTAATATAGCGGAGCTGGTGAGACAAGAGTGTGGCGGAACCGTAGTTACTGATCACAAGTCGCCTTATAGGGTTCCTAAATCATCCTCCTCCTCCTTGTTGGCTATGGACGAAACCACCAACAATTTGGTGGCCAAGCCAATAGTTTCTATTGGGAACATGCTATGGTCTCAGATAGAACGCCTTTCAGGTAGTTTTGGCTCCATTAGATCCTGA 1449 0.5128 MDIFYHPHMDREIESLIERIHPPRVCIDNDSCRECTVVKVDSANKHGILLEMVQVLTDLDLIISRSYISSDGGWFMDVFHVTDQAGKKLTDETLMLHIQQKLCTTRRKGNISSDEDDETTSEPYGCDGPHSPQNTALEMTGLDRPGLLSEIAAVLAELGCTVTSGMAWTHNDRAACIIYVEDALKAGPIKDPIRLGHVQEQLQNVVEAHGDIGERKSVRLRNLAAGRTHTERRLHQLMYADRDYESCRACHGESSGEHKKGCDGTHVSVSRCKDKGYWVVNVRSRDRPKLLFDTVCVLTDLHYVVFHAAIRSKSSMAEQEYFIKHAVAGACLDEESERQKLILCLIAAIERRVSHGLRVDIRTKNRTGLLSNVTRVFRENGLSVSRVEIGTQGDNAVGSFFVTDSSGQQVNPNIAELVRQECGGTVVTDHKSPYRVPKSSSSSLLAMDETTNNLVAKPIVSIGNMLWSQIERLSGSFGSIRS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00541 482 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 481 IPR040217 -
Aip05g00541 482 SUPERFAMILY ACT-like 132 210 IPR045865 -
Aip05g00541 482 SUPERFAMILY ACT-like 354 414 IPR045865 -
Aip05g00541 482 SUPERFAMILY ACT-like 32 90 IPR045865 -
Aip05g00541 482 Pfam ACT domain 361 422 IPR002912 -
Aip05g00541 482 CDD ACT_ACR_1 35 106 - -
Aip05g00541 482 MobiDBLite consensus disorder prediction 107 131 - -
Aip05g00541 482 ProSiteProfiles ACT domain profile. 136 217 IPR002912 -
Aip05g00541 482 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR1 4 481 - -
Aip05g00541 482 ProSiteProfiles ACT domain profile. 358 435 IPR002912 -
Aip05g00541 482 Gene3D - 134 209 - -
Aip05g00541 482 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00541 Aip-Chr5 6388125 6392483 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00541 - - adu:107487637 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00541 05 6388125 6392483 Aip05g00541 05 6388125 6392483 ECH