Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00482 ATGGCAAGTGTTATTAATCTTTCAACTTCCATCTCCGTCTTCAAATCCGATCTGTGTTCTTCCAGACACATCGCCGACGTGGTGCTCCTCCACGCCAAGCCTCCAACAATATGGAAATCGCGACCACTTTGCCACCAACCCGCATCAATGAGCTTCACTCAAATTTCCTCCTCCAATGGCTTTCCACCTCTTGAAGACAGCGACAGGTCAAACTCTCCCTTTGAGGTTCTCCCTGCTGATTACGGTGTCCACGTGGGAGCGGTGACTTCCGATTTACGCAGGAAAACTAAGATAGTGTGCACGATAGGTCCCGCTACCAGCTCCCGTGACATGATATGGAAGCTTGCCGAAACTGGAATGAACGTGGCGCGATTGAATATGTCCCATGGTGACCATGCATCGCACCAGAAAACCATTGATTTCGTTAAAGAATACAATGCTCAGTTTCAAGACAATGTTATAGCTATCATGCTTGACACCAAGGGTCCTGAAGTTAGGAGTGCGGATGTACCTCAGCCAATTTTACTCAAGGAAGGTCAAACATTCAATTTCACCATTAGGAGGGGTGTCTCCACTGAAGACACTGTCAGTGTCAATTATGATGACTTTGTCAATGATGTTGAGGTTGGAGACATATTACTCGTTGATGGGGGAATGATGTCTCTTGCTGTTAAGTCAAAGACAAATGACTCAGTTAAATGTGAAGTGATTGATGGTGGAGAATTGAAATCTAGGCGTCATTTGAATGTCCGGGGAAAAAGTGCAACACTTCCTTCCATAACTGAGAAGGATTGGGAAGATATCAAGTTTGGGGTAGACAATCAAGTAGACTTTTATGCTGTCTCATTTGTCAAGGATGCAAGAGTGGTTCATGAGTTAAAAGACTACCTCAAAAGTCATAATGCTGATATACATGTGATTGTAAAAATTGAAAGTGCGGATTCTATACCAAATCTTCATTCAATACTTTCAGCTTCAGATGGGGCCATGGTTGCTCGTGGTGACCTTGGAGCTGAACTTCCAATTGAGGAAGTTCCTTTACTGCAGGAGGATATCATAAGAAGATGTCATGGTATGCAAAAGCCGGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTGCTCATCCTACACCAACAAGGGCAGAAGTGTCAGACATTGCAATTGCCGTAAGAGAAGGTACAGATGCCATCATGCTTTCTGGAGAAACTGCTCATGGAAAATATCCATTGAAAGCTGTTAAAGTTATGCACTCGGTGGCTTTAAGGACTGAATCAAGTATTAAGAATAGTGAAGCTTATCCAGGAAACTTAAGTCCGCATAAAAGCCGCATGGGAGAAATGTTTGCTTTCCACTCGACAACTATGTCTAATACTCTAAATGCTCCTATCATTGTTTTTACCAGAACAGGATCCATGGCTATTCTTTTGAGCCATTATAGGCCTTACTCGACAATCTTTGCGTTCACAAATCAAGAACGGATTAAGCAGAGGTTGGCACTTTATCATGGGGTCATGCCCATATTCATGCAATTTTCAAACGATGCAGAGGAGACCTTCTCTAGAGCCATTAAGCTTCTCCTGAGTAAGGGTCATTTGCTCGAGGGACAGCATGTTACCCTTGTTCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCCACTCACCACATACAAGTTCGTAAGGTTCAAGGATAA 1698 0.4335 MASVINLSTSISVFKSDLCSSRHIADVVLLHAKPPTIWKSRPLCHQPASMSFTQISSSNGFPPLEDSDRSNSPFEVLPADYGVHVGAVTSDLRRKTKIVCTIGPATSSRDMIWKLAETGMNVARLNMSHGDHASHQKTIDFVKEYNAQFQDNVIAIMLDTKGPEVRSADVPQPILLKEGQTFNFTIRRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTNDSVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKDYLKSHNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCHGMQKPVIVATNMLESMIAHPTPTRAEVSDIAIAVREGTDAIMLSGETAHGKYPLKAVKVMHSVALRTESSIKNSEAYPGNLSPHKSRMGEMFAFHSTTMSNTLNAPIIVFTRTGSMAILLSHYRPYSTIFAFTNQERIKQRLALYHGVMPIFMQFSNDAEETFSRAIKLLLSKGHLLEGQHVTLVQSGAQPIWREESTHHIQVRKVQG 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00482 565 PRINTS Pyruvate kinase family signature 152 168 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 PRINTS Pyruvate kinase family signature 276 290 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 PRINTS Pyruvate kinase family signature 306 332 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 PRINTS Pyruvate kinase family signature 333 357 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 PRINTS Pyruvate kinase family signature 358 382 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 PRINTS Pyruvate kinase family signature 383 401 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 PRINTS Pyruvate kinase family signature 402 418 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 82 563 - -
Aip05g00482 565 PANTHER PYRUVATE KINASE 82 563 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 Pfam Pyruvate kinase, barrel domain 94 432 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 Gene3D - 94 424 IPR040442 -
Aip05g00482 565 TIGRFAM pyruv_kin: pyruvate kinase 94 563 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g00482 565 Gene3D - 163 258 IPR015806 GO:0004743|GO:0006096
Aip05g00482 565 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 93 428 IPR015813 GO:0003824
Aip05g00482 565 ProSitePatterns Pyruvate kinase active site signature. 304 316 IPR018209 GO:0004743|GO:0006096
Aip05g00482 565 SUPERFAMILY PK beta-barrel domain-like 163 254 IPR011037 -
Aip05g00482 565 Gene3D - 425 543 IPR036918 -
Aip05g00482 565 Pfam Pyruvate kinase, alpha/beta domain 456 543 IPR015795 -
Aip05g00482 565 SUPERFAMILY PK C-terminal domain-like 412 563 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00482 Aip-Chr5 5448313 5452107 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00482 K00873 - twl:119987043 847.81