Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00479 ATGCATATGAAGGCAAAGAGAGGAAAACGTTCAGAGGCCTTTTGGCCTTCCATTGTGATGAAAAAGTGGCTGAATATTAAGCCTAAGGCCAATGATTTTAGTGAAGATGAAGTTGATGCTGAAACTGAAACAGAAACTGAGAGTGAAGATGATGGTTCTGTTAAGGATTCAAGAACTCGAATGCTCCAAGATAATCCACCTAGAACTCAAGGGAACCAATGCATATTCCAAAGTCAATTATCATCAGGCAATAATTCTCTTGCTGCTTGCAAGGGAAACAAGACAAGACACAGAAGAGGGAAATCAGAAACACTTCGTGCTCAGTACATAAATTCTAAGGAAGTGAGGGTAACAATTGGAACTTGGAATGTTGCTGGAAGAACTCCAAGTGAAGATCTTGGGATTGATGAATGGCTTTCTACTCAAGAACCAGCAGATATTTACATTCTGGGGTTTCAAGAGGTAGTTCCATTGAATGCTGGAAATGTACTAGGAGCAGAGGACAATGCACCAATCAGAAAATGGGAAGCAATCATTAGAGGAACACTAAACAAGTCTTGTGAGCCTGATGGAATACACAAAAGTTACAGCGCGCCTCCTTCGCCGGTGCTAAGAACTACTTCTGCTGATGATATTCTTCTAGCAGAGAATATAGATGGTAATGCAATAGATATGGTGATGAATGAGGAGTATGTGGGAACTGTAGCTGACAATTATGATCTGCATCAGCAGAATGAAGCTAAAGATATAATTGGGATAAGCAAGAGTTTGGAGTTGAGAAAAATCTATGGCCTTGATCTTCAGAAGATAATAGATTGGCCTGAAAGACCACTAGATGCAATCCCACAAATTGTTGATTCAGATGCAAAGTTGAGGAGAGTACTAAGTAGCTCAGCAAGAATTGGATTTAACAGGAATGAAAGTTCTTTGATATATGGTGCTGGATTGAAGCGCTCGCACCATAGTTCTGGAAACTTGGGATTGTTGTGGAAAGAGCAGAAAGTGATACCTGAAATAGTTGAGTCCTTAGATGAAGTCACTGACCTGTTAACAGCTGAGGAAGATGATGCTTTTGTTGAGTTACCCGAAAGCCATGTTCATGACAATGAAGATGGATTAAGTGCCTTGAATTCGCGGCCGAGGTATGTTCGGATCGTCAGCAAGCAAATGGTAGGGATCTATGTCTCTGTTTGGGTGCAGAGGAAGTTGAGAAGACACATTAACAATTTGAAAGTTTCTCCTGTTGGTGTTGGTCTCATGGGCTACATGGGAAACAAGGGTTCTGTTTCAGTTAGTATGTCTCTCTATCAGTCACGCCTGTGCTTCGTTTGCTCCCACCTTACTTCCGGCCAAAAGGATGGAGCTAGGCGAAACTCCGATGTTCACGAAATCCTAAGAAGAACTTGCTTTTCATCATCTTCTGTCTTTGATACAGATCAACCACAAACAATCCCATCTCATGATCAGATTTTCTGGTTTGGGGATTTGAATTATCGTATTGACATGTTGGATACCGAGGTTCGAAAGTTGGTGGCTCTAAAGAAGTGGGATCAACTTAAGAATAATGATCAACTAAGCAAAGAATTGCGAGAGGGGCATGTATTTAGTGGATGGAGAGAGGGATTGATAAACTTTCCACCAACTTACAAGTATGAATTTAACTCTGATAGATATGTTGGTGAGAACACAAAAGAAGGTGAAAAGAAGAGATCTCCAGCATGGTGTGACCGTATATTGTGGCTAGGGAAAGGTATAAAGCAACTTCAATATGAACGTGCAGAAATTAAGCTCTCAGATCATAGACCTGTTAGTTCAATATTCTTGGTTGAAGTTGAAGTATTTGACCACCGAAAACTTAAGAGAGTTTTAAATGTCAATAGTGCAGCAATACACCCTGAGATCTTTCTTGATGAAGATGGGTGTGAGATCTCTTCTGTCTTTGAAGTCATGTGGCAAATTTATAAGGAGCATTATGGCAAATCTGAGTTACATGGAAGCCAATAG 2004 0.4052 MHMKAKRGKRSEAFWPSIVMKKWLNIKPKANDFSEDEVDAETETETESEDDGSVKDSRTRMLQDNPPRTQGNQCIFQSQLSSGNNSLAACKGNKTRHRRGKSETLRAQYINSKEVRVTIGTWNVAGRTPSEDLGIDEWLSTQEPADIYILGFQEVVPLNAGNVLGAEDNAPIRKWEAIIRGTLNKSCEPDGIHKSYSAPPSPVLRTTSADDILLAENIDGNAIDMVMNEEYVGTVADNYDLHQQNEAKDIIGISKSLELRKIYGLDLQKIIDWPERPLDAIPQIVDSDAKLRRVLSSSARIGFNRNESSLIYGAGLKRSHHSSGNLGLLWKEQKVIPEIVESLDEVTDLLTAEEDDAFVELPESHVHDNEDGLSALNSRPRYVRIVSKQMVGIYVSVWVQRKLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLYQSRLCFVCSHLTSGQKDGARRNSDVHEILRRTCFSSSSVFDTDQPQTIPSHDQIFWFGDLNYRIDMLDTEVRKLVALKKWDQLKNNDQLSKELREGHVFSGWREGLINFPPTYKYEFNSDRYVGENTKEGEKKRSPAWCDRILWLGKGIKQLQYERAEIKLSDHRPVSSIFLVEVEVFDHRKLKRVLNVNSAAIHPEIFLDEDGCEISSVFEVMWQIYKEHYGKSELHGSQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00479 667 Gene3D Endonuclease/exonuclease/phosphatase 332 633 IPR036691 -
Aip05g00479 667 SUPERFAMILY DNase I-like 106 627 IPR036691 -
Aip05g00479 667 SMART i5p_5 305 615 IPR000300 GO:0016791|GO:0046856
Aip05g00479 667 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 9 638 IPR045849 GO:0004445|GO:0046855
Aip05g00479 667 Gene3D Endonuclease/exonuclease/phosphatase 95 207 IPR036691 -
Aip05g00479 667 MobiDBLite consensus disorder prediction 36 50 - -
Aip05g00479 667 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 9 638 - -
Aip05g00479 667 MobiDBLite consensus disorder prediction 30 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00479 Aip-Chr5 5415920 5418968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00479 374 580 Acyl Lipid Metabolism Gene Families AT2G31830 36.207 3.41e-39 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00479 K24221 - ccaj:109800886 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00479 05 5415920 5418968 Aip01g01242 01 34133145 34139869 PCT