Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00470 ATGACGACTTCTTCTCATACCTGCGTCGAAAGCAAGGGTTCTCTTGCTAGACTAGCTCCCCTTGAGGCAGTGCTCTTTGATGTAGATGGAACTCTCTGTGACTCTGATCTACTCCATTACTATGCTTTCCGCGAAATGCTCCAAGAGATTGGTTACAATGGAGGTACTCCTATAACAGAGGAATTCTATAGTGAGAATATTTCTGGCACACACGACGAGGATGCTGCCTTGTTTCTCTTTCCTGACGACCGGGAACGGGGTTTGAAGTTCGTAGAAGATAAGGAAGCCATGTTCCGGAAATTGGCAAAAGATCAACTAAAGCCTTTAAATGGCCTTGATAAAGTGATTAAATGGGTTGAAGATCGTAGCTTGAAGCGCGCTGCAGTGACCAATGCTCCAAGACCGAATGCAGAGCTCATGATCTCAAAGCTTGGCCTCTCAGATTTCTTTGATGCTGTCATTATCGGTAGCGAATGTGAACATGGCAAGCCTCATCCAGATCCCTACCTTAAAGGTCTTGAAGCTCTCAAAGCATCAAAGGATCACACATTTATATTTGAGGATTCTGTCTCAGGGATCAAAGCTGGAGTGGCTGCTGGGATGCTTGTTATTGGTATAACCAACTGGAATGCAGAGCATTTACTGATGGAAGCAAAGCCTACCTTTCTGATTAAGGATTATGATGATCCAAAACTGTGGGCAGCTTTGGATGAACTTGACAAGGCTGGTGCTCGTTGA 738 0.4485 MTTSSHTCVESKGSLARLAPLEAVLFDVDGTLCDSDLLHYYAFREMLQEIGYNGGTPITEEFYSENISGTHDEDAALFLFPDDRERGLKFVEDKEAMFRKLAKDQLKPLNGLDKVIKWVEDRSLKRAAVTNAPRPNAELMISKLGLSDFFDAVIIGSECEHGKPHPDPYLKGLEALKASKDHTFIFEDSVSGIKAGVAAGMLVIGITNWNAEHLLMEAKPTFLIKDYDDPKLWAALDELDKAGAR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00470 245 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 4 242 - -
Aip05g00470 245 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 21 229 - -
Aip05g00470 245 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 206 IPR006439 -
Aip05g00470 245 Gene3D - 22 229 IPR023214 -
Aip05g00470 245 CDD HAD_BPGM-like 23 208 - -
Aip05g00470 245 Gene3D Putative phosphatase; domain 2 36 104 IPR023198 -
Aip05g00470 245 SUPERFAMILY HAD-like 19 238 IPR036412 -
Aip05g00470 245 Pfam Haloacid dehalogenase-like hydrolase 24 205 IPR041492 -
Aip05g00470 245 SFLD Haloacid Dehalogenase 21 229 - -
Aip05g00470 245 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 4 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00470 Aip-Chr5 5350902 5352822 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00470 - - cam:101496926 391.349