Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00469 ATGACCGTCTCCTCTGAAAGCAAGAATTCTCTCACCCAACTAGCTCCACTTGAGGCAGTGCTCTTTGATATAGATGGAACTCTCTGTGACTCTGATCCACTCCACTACTACGCATTCCGTGAAATGCTCAAAGAGATTGGTTTCAATGGAGGTGTTCCTATAACAGAGGAATTTTTCATTGAGACTGTTGCCGGCAAGCACAATGATGATATTGCCTTGGCTCTCTTTCCTGGTGATCTTGAACGAGGCTTAAAGTTTGTAGATGACAAGGAAGACATGTTCCGGAAATTGGCAAAAGAGCAAGTAAAGCCATTGAATGGCCTTGATAAAGTGAGGGAATGGATTGAAAGTCGTGGGCTGAAAAGAGCGGCAGTGACCAATGCTCCAAGAGCTAATGCAGAACTCATGATCTCATTGCTTGGTCTCTCAGACTTTTTTCATGCTGTCATTATTGGTGGAGAATGTGAACATGCCAAGCCTCATCCAGACCCCTACTTGAAAGGTCTTGAAGCTCTGAAAGCATCAAAGGATCACTCATTTGTATTTGAGGATTCTGTTTCTGGGATCAAAGCTGGAGTGGCAGCTGGGATGCCTGTTGTAGGTTTAGCTACTCGAAACCCGGAGCATCTACTGATGGAAGCAAAGCCTGCCTTTCTGATTAAGGATTATGCAGACCCAAAATTGTGGGAAGCTTTGGAAGAACTTGACAAGGCTGGTACTAAAAAAGTATGA 732 0.4426 MTVSSESKNSLTQLAPLEAVLFDIDGTLCDSDPLHYYAFREMLKEIGFNGGVPITEEFFIETVAGKHNDDIALALFPGDLERGLKFVDDKEDMFRKLAKEQVKPLNGLDKVREWIESRGLKRAAVTNAPRANAELMISLLGLSDFFHAVIIGGECEHAKPHPDPYLKGLEALKASKDHSFVFEDSVSGIKAGVAAGMPVVGLATRNPEHLLMEAKPAFLIKDYADPKLWEALEELDKAGTKKV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00469 243 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 4 238 - -
Aip05g00469 243 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 17 225 - -
Aip05g00469 243 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 17 225 - -
Aip05g00469 243 CDD HAD_BPGM-like 19 204 - -
Aip05g00469 243 Gene3D Putative phosphatase; domain 2 32 100 IPR023198 -
Aip05g00469 243 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 4 238 - -
Aip05g00469 243 Pfam Haloacid dehalogenase-like hydrolase 20 201 IPR041492 -
Aip05g00469 243 Gene3D - 18 225 IPR023214 -
Aip05g00469 243 SUPERFAMILY HAD-like 14 234 IPR036412 -
Aip05g00469 243 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 201 IPR006439 -
Aip05g00469 243 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 17 28 IPR006439 -
Aip05g00469 243 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 115 128 IPR006439 -
Aip05g00469 243 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 146 162 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00469 Aip-Chr5 5347130 5349471 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00469 - - gmx:100793483 432.565