Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00453 ATGGATGACTTGTCAAGGATCAGCAACGACCTAGCTCAGATCGATGGACAGATCACCGACGTTTTTCGTGCTTTATCAAATGGATTCCAAAAGCTGGAGAAGATTAAGGAATTTAGCAGGCAGAGCAGGCAGTTGGAAGATCTTACAGAGAAAATGCGCGACTGTAAGCGGCTTATAAAAGAATTTGACAAAGAAGTAAAGGTTTTGGAGGATAGACTTGACAGAGGAACCAACAAAATGCTGAACGATAAAAAGCAATCAATGATCAAAGAGTTAAATTCATATGTTGCTTTGAAAAAGAAATATGCTACAAATATTGAGAATAAGCGAATTGAGCTCTTTGAAGGACCTAGTGATGGTCAAGTAGAAGAAAATGTTTTGTTGGCTTCATCAATGACAAATGAACAACTAATTAATAAGGGACATCAAATGATGGATGAAACAGACCAAGCTATTGACAGGGGAAAGAAGATTGTTCAAGAGACACTAAATATTGGAACAGAGGCTGCAGCAACTTTAAAGTCTCAGACAGAACAAATGAGCAGAGTCGTTAATGAGTTGGATTCTATTCATTTTTCAATGAAAAGAGCCTCTAAATTGGCCAAGCAACTTGGTAGGCAGATTGCTACTGACAAATGTATTATGATGCTATTGTTTCTTATTGTCATTGGAGTGATAGCTATTGTTATTGTAAAGCTTATCAACCCAAACAACCAGGACATTCGTGACATTCCAGGATTAGGCCCTCCAGCTTTGACCAGAAGATTGCTTTGGGATCATATTGTTAATGAGCATTTCTGA 801 0.3783 MDDLSRISNDLAQIDGQITDVFRALSNGFQKLEKIKEFSRQSRQLEDLTEKMRDCKRLIKEFDKEVKVLEDRLDRGTNKMLNDKKQSMIKELNSYVALKKKYATNIENKRIELFEGPSDGQVEENVLLASSMTNEQLINKGHQMMDETDQAIDRGKKIVQETLNIGTEAAATLKSQTEQMSRVVNELDSIHFSMKRASKLAKQLGRQIATDKCIMMLLFLIVIGVIAIVIVKLINPNNQDIRDIPGLGPPALTRRLLWDHIVNEHF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00453 266 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 250 - -
Aip05g00453 266 SUPERFAMILY SNARE fusion complex 132 205 - -
Aip05g00453 266 Gene3D - 134 212 - -
Aip05g00453 266 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Aip05g00453 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Aip05g00453 266 Coils Coil 38 79 - -
Aip05g00453 266 SMART tSNARE_6 137 204 IPR000727 -
Aip05g00453 266 PANTHER NOVEL PLANT SNARE 11 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00453 Aip-Chr5 5067318 5071178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00453 K08494 - gmx:100796579 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00453 05 5067318 5071178 Aip05g00453 05 5067318 5071178 ECH