Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00447 ATGGATTTCTCGGAGAAGGACCTTTTCGGCGAAGATTCCGACAACGAACAAGATGGGACCCGCTCAACGTCGCCGTCGTCGTCCTCCTCTTCTTCCGCTTCATCCTCATCCTCGTCCTCTGCCTCTACCTCCAACGGCACTGAAGGTGAAGGCGGCGGCGGCGCCAACTCGACCTCCTCCGGCAGCGGAACGGCAAGCAGCGGCGCCGCCGCTGGAGATGACGATGACGAAAACGGCGATGAGGTGGAGCAAAGTAACAAGGCTTCTTACGCTAATTATAACGATCATGATGATGAGTATGAAGATAAAGATCTGTTTGGCTCTGACAATGAAGATTATTGTAAAACCCTTGTCAAAAGCCCTTACCCTATTCCCGTGTTGCCTGCCATTCGCAACACGAACAATCAGGGTAGAGGGGGTTTTGGTGGCCGCGGTCGTGGTCGCTGGCAGCCGGGACATCAGAATGATAGAGGCGCCGGCCTTCTTCCTCGTCCTGGACCATATCCCCAGAGGCAAAATTTTGGGTATGGAAACAGGTTTTCCAATGGTCGCCACGATGAACGGTTTGTCTCTGAAATGAAGCTGTCTAAGAGCGAAGAAACTCTGTCAAGAAAGTGCATTGCTTTTCAGGAGCCTTGTGAAATTGCCTGTTATAGTCGTGTAGAAGGTGGACAAGTATTTTTCGATGATCGTAGTGTGAGGCTTTTTAAGCGTCTTATCTCTGAAGATGTTGGGGCTGATTTGAATGAAGGTTATGATACATTCATTCCCAAACAAGCAGACTTAGGGTCAGAAGGCTTTGGTGACCTTCTTGCTTGCATTAGAGACAAAGGTATCCAACTTCAAAACAACATTCATTTTGTGGTATGTTGTATGTTTTCTTGTAATCTTTTTATTATGGCTACAGCATATATCCGACATGAGCCTTGGGAAATGGGGGTGCACAAAAGGAATGGTGTTGTCTATCTTGATGTACATAAACTACCAGAAAGACCACAAAGTGATTTAGATCGCAGGAGATGTTATTGGGGATATTGTTTTGAGAGCCTTGCCACTGAAGATCCTACAAGAGATGATGGAGAGGGGATACATCATGTCAATGCCAATGTTGAATTTTTCGTGAGGTTGGCTACCTTGTGTTTAACTTCAATCATAGCTTCTCTTCTCCTTTTTAAGTACTATTTGTGTTGGCTTAACAACGTGAATCTATCATTTCTATTGATGCAGTTGGAATATCATACTGAGGAAAAATATGAGAGAGAGAAATTGTTAAAATTTTGGATTCAATCATTCCTGGCAGGTGTTCCGTATATTGTCATAGGATTTAGCTGTGATACAGGGATGATTCTGGTCGTCTTGTTCGGACAGAAAGACTTAGAACCAAAGATATTACACAGAGAGTAA 1404 0.448 MDFSEKDLFGEDSDNEQDGTRSTSPSSSSSSSASSSSSSSASTSNGTEGEGGGGANSTSSGSGTASSGAAAGDDDDENGDEVEQSNKASYANYNDHDDEYEDKDLFGSDNEDYCKTLVKSPYPIPVLPAIRNTNNQGRGGFGGRGRGRWQPGHQNDRGAGLLPRPGPYPQRQNFGYGNRFSNGRHDERFVSEMKLSKSEETLSRKCIAFQEPCEIACYSRVEGGQVFFDDRSVRLFKRLISEDVGADLNEGYDTFIPKQADLGSEGFGDLLACIRDKGIQLQNNIHFVVCCMFSCNLFIMATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYWGYCFESLATEDPTRDDGEGIHHVNANVEFFVRLATLCLTSIIASLLLFKYYLCWLNNVNLSFLLMQLEYHTEEKYEREKLLKFWIQSFLAGVPYIVIGFSCDTGMILVVLFGQKDLEPKILHRE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00447 467 PANTHER DOM-3 RELATED 18 449 IPR039039 -
Aip05g00447 467 PANTHER BNAC01G10220D PROTEIN 18 449 - -
Aip05g00447 467 MobiDBLite consensus disorder prediction 1 84 - -
Aip05g00447 467 MobiDBLite consensus disorder prediction 128 164 - -
Aip05g00447 467 MobiDBLite consensus disorder prediction 19 67 - -
Aip05g00447 467 Pfam RAI1 like PD-(D/E)XK nuclease 413 448 IPR013961 -
Aip05g00447 467 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00447 Aip-Chr5 5023274 5028571 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00447 K14845 - gmx:100798780 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00447 05 5023274 5028571 Aip05g00447 05 5023274 5028571 ECH