Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00443 ATGGGTCGCAAGCACGATGAAAAAAGTACCATTCTTTACAACCGTTTGATCCTTCTCTTAGTCTCCTTTGCTTCCTGCGGTTTCGTCTACTTCTTCCTCTCTGCGGTCCTCACCAAAAACTCGTCCATTTCTTTGTCTGGGTCGTCGTCGTTGGCATTGGTCGGAGAAGGAGGTGGTGGAGGATGCTGCAGAGGGATTGAGAATTTGGAGCTATGGGGTGCTGCAGTGAAGTGGGGTTCTGATTTTAAGTTCAACAGCTCCGAAGATTGCTGCAACGCTTGCAAATCAATGTGCACCGGTAATGATGGACCATGCCTCTGTGACACGTGGGTGTTCTGTGGGAACCGTGAAGCTTGTGGATCCAAGTTCGGTGAGTGTTGGTTGAAGAAGCAGAAGGACAGCTTAGCCCCTGAAAAGCAAGATGGTGGGCCTCCAGGGGAAGAAAATTATTGGATTTCTGGTCTCATCTTTGGAAAAGGAGAGGGTATTATTGCAATGGAAACTGAATTTGGAACTCTTCATATGAAACTTTTCCCTGACTGTGCTCCACACTCAGTTGCCTACATTCTAGAGTTGTTGGCATTGCGCCACTGTGCAGGTTGCCAATTTTACCGTGCAGAGAGCCGAGGTGAATCATGGGATTCAGAAGGAAACCACATAAAAAATGCTGCTTTTGAATTCTTTATTAGCTTAGCTAACCATGCAGAGTGGAAACATGAATACACTGTCTTTGGTTCTGTTCTTCCAGAAGACTTGCATGTTGCTGAGAAAATTGCTACCCTCCCTACAGCATCAGATGTTTGGAACAACATTAATGTCACCGTTTTGAAAAGCCCTGTCCCCTTGTCGCTTGGTAGAATCAAGAAGAGACATGAAGATTGA 882 0.4592 MGRKHDEKSTILYNRLILLLVSFASCGFVYFFLSAVLTKNSSISLSGSSSLALVGEGGGGGCCRGIENLELWGAAVKWGSDFKFNSSEDCCNACKSMCTGNDGPCLCDTWVFCGNREACGSKFGECWLKKQKDSLAPEKQDGGPPGEENYWISGLIFGKGEGIIAMETEFGTLHMKLFPDCAPHSVAYILELLALRHCAGCQFYRAESRGESWDSEGNHIKNAAFEFFISLANHAEWKHEYTVFGSVLPEDLHVAEKIATLPTASDVWNNINVTVLKSPVPLSLGRIKKRHED 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00443 293 PANTHER EXPRESSED PROTEIN 1 225 - -
Aip05g00443 293 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 225 - -
Aip05g00443 293 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 217 271 IPR002130 GO:0000413|GO:0003755
Aip05g00443 293 SUPERFAMILY Cyclophilin-like 154 277 IPR029000 -
Aip05g00443 293 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 226 290 - -
Aip05g00443 293 Gene3D - 157 208 IPR029000 -
Aip05g00443 293 Gene3D - 209 282 IPR029000 -
Aip05g00443 293 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Aip05g00443 293 PANTHER EXPRESSED PROTEIN 226 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00443 Aip-Chr5 5000764 5003933 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00443 - - gmx:100820360 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00443 05 5000764 5003933 Aip05g00443 05 5000764 5003933 ECH