Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00439 ATGGTTCAATTCCACGAGCACATCATCACAGAACTTCTAGAAGATATCAATGGCGGATTGGTGGTGCTCTCCTCCGGTCTCTCGCTGTCGAAGCTGGTGTCGTCCCTTCTCCTCCTCCACACTCATTCAGAGGGAACACTCCTCATCCTCTCCCCTTCCTCCGCAACTCTTAGGTCCCGAATCACCTTCAATCTCAAAACCCTAAACCCTCAATTCACCCAAATCCCCTCCGAGATCACCGCCGAACTCCCCGCCCACCACCGCCACTCCCTCTATTCCTCCGGCAACATCTTCTTCATCACTCCCAGGATTCTCATCGTAGATCTCCTCACCAACAAGATCCCCACATCCATGATCTCCGGAATCATCATCCTCAATGCGCATTCTCTCAGTGAAACCTCCACCGAGGCCTTTATCATCCGAATTTATCGATCACTGAACCGTGGCGGTTACGTCCGGGCTTTCTCCGATAAGCCGCACGCGATGGTGTCCGGGTTCGCGAAGGCGGAACGGACAATGAAGTTCTTGCATGTGCGGAGGCTGCACCTTTGGCCAAGGTTTCAGGTCTACGTGTCGCAGGAGCTGGAAAGGGACCCGCCGGAGGTGGTGGACATCAGGGTTCCGATGAGCAGGTACATGGTGGGGATCCAGAAGGCCATTGTGGAGGTCATGGATGCTTGCTTGAAGGAGATGAGGAAGACCAATAAGGTCGACGTGGAGGATCTGACGGTGGAGAACGGGTTGTTCAAGTCGTTTGATGAGATCGTGAGGCGCCAATTAGACCCAATTTGGCATACTCTGGGGAAGAAGACTAAGCAACTTGTTTCGGACCTTAAGACATTGACGAAATTGTTGGATTATCTTGTGAGGTATGATGCAGTAACTTACTTGAAATACTTGGATACGCTAAGGGTGTCCGAGAGTTTTCGATCTGTTTGGCTATTTGCAGAGGCAAGTTATAAGATTTTTGACTTTGCAAAGAAACGTGTTTATCATCTTGTGAGGTCGGACGGTACAAAAGTAAGTGAAGTGAACAAGAGTGCTAAAAACAAAAAGAGGAAGGTTAAGGAGGATAACAAAGACAGTGAAGAAGCAGATGATGGGACTTCTTCAAGTTCGAATGCCGGCTTAGTTTTGGAGGAAGTCTTGGAAGAAGCACCAAAATGGAAGGTCTTACGTGAGATTCTTGAGGAAATAGAAGAAGAAAGGCAAAAGCAAGGCGGGTTAAGAGAGGAATTATTGGCCGAAGGTAAAGACACTGACAATGGCATTGTATTGGTGGCATGTAAGGATGAACGATCATGCCTGCAGATTGAAGAATGCATTTTCAAAAGCCCACAAAAGGTCATGAGTGAAGAATGGAAAAAGTACTTGCTAAGCAAAGTACAGCTGCGTGATATAGTGCATAAGAAAAAGAAGCCAAAAGATCCCAAAGGTTTTGGGATTCTTGATGGAGTTACTCCCATAGCACCTGCTCAGAATGCGGAAACCAGCAGCATTAGTAAGCAGGAGCATGATGCACTTCTCGCAGCAGCATCAGGACTAAGAGGTCTTGCTGAAAATGACTTTGAAGATCCTCAGCCAGATTTTGGTGGACGGGGTCGTGGAAAAGGAAAGAGAAAAGTAGGGAATAAAAAGGGTCCAATCATTAATGATGAAGTACAAAGTGGTAATAGAGAGGCTTCCACTAGTTATAAAGCTGAGACATCTGTAGAAAACATGGTCCTTAGAAAGCATAAAAATCCTGATACCACAACAGCAAATGCAAAGCCATTACCACCAGTACAGCTTTATGCCTTAGAAAGTGATCAGCCTATACTGGATATATTAAAGCCCTCTATAGTCATTGTTTACCATCCAGACGTGGCCTTTGTTAGGGAAATTGAAGTTTACAAAGCTGAGAATCCCTCAAAAAAGTTGAAAGTATATTTTCTATTCTACGAAGATTCTACTGAGGTTCAGAAGTTTGAGGCGAGTATACGTAGAGAGAATGGAGCATTCGAATCTTTGATAAGACAAAAATCTATGATGATGATTCCAGTTGACCAGGGTGGACATTGTTTGGGAATGACTTCTAGTTTTGAGTCAGATTTAAGTAGTACTCAAAATTCAATGACCAGAAGAGCTGGTGGGAGAAAGGAGGTTGATAAAGAAATGCAGGTCATTGTGGACATGCGAGAGTTCATGAGCAGTCTTCCCAATGTTCTTCATCAGAAGGGAATGCGCATCATTCCAGTGACACTAGAAGTTGGTGACTACATCCTGTCACCATTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTCTTTATGAGCTTCACATCAGGTCGTCTATACCACCAGGTGGAGACAATGGTGCGATATTATAGGATTCCTGTTCTGTTGATAGAGTTTTCACAGGATAAGAGCTTTTCATTCCAGTCTGCTAGTGATATTGGTGATGATGTGACACCAAATAACATTATATCAAAGCTGTCATTGCTTGCTCTACACTTTCCACGGCTACGAATTATCTGGTCTCGAAGTTTGCATGCAACTGCTGAAATATTTGCTGCACTGAAGGCAAATCAAGATGAACCGGATGAAACAAAAGCTATGAGAGTGGGTGTCCCCTCTGAAGAAGGAATTGTGGAGAACGACGTAAGAGCTGAAAATTACAACACGTCGGCTGTGGAGTTTCTAAGAAGACTGCCAGGCGTTACAGATTCAAACTACAGGGCCATAATGGATGGATGTAAGAGCTTGGCTGAACTTGCGCTTCTTCCTTTGGAGAAGCTAGCCGAATTAATGGGTGGTCATAAAGCTGCTCGGACTCTAAGAGAATTTCTTGATGCTAAATATCCAACTCTGTTGTGA 2856 0.4468 MVQFHEHIITELLEDINGGLVVLSSGLSLSKLVSSLLLLHTHSEGTLLILSPSSATLRSRITFNLKTLNPQFTQIPSEITAELPAHHRHSLYSSGNIFFITPRILIVDLLTNKIPTSMISGIIILNAHSLSETSTEAFIIRIYRSLNRGGYVRAFSDKPHAMVSGFAKAERTMKFLHVRRLHLWPRFQVYVSQELERDPPEVVDIRVPMSRYMVGIQKAIVEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLTKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWLFAEASYKIFDFAKKRVYHLVRSDGTKVSEVNKSAKNKKRKVKEDNKDSEEADDGTSSSSNAGLVLEEVLEEAPKWKVLREILEEIEEERQKQGGLREELLAEGKDTDNGIVLVACKDERSCLQIEECIFKSPQKVMSEEWKKYLLSKVQLRDIVHKKKKPKDPKGFGILDGVTPIAPAQNAETSSISKQEHDALLAAASGLRGLAENDFEDPQPDFGGRGRGKGKRKVGNKKGPIINDEVQSGNREASTSYKAETSVENMVLRKHKNPDTTTANAKPLPPVQLYALESDQPILDILKPSIVIVYHPDVAFVREIEVYKAENPSKKLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQGGHCLGMTSSFESDLSSTQNSMTRRAGGRKEVDKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNNIISKLSLLALHFPRLRIIWSRSLHATAEIFAALKANQDEPDETKAMRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPLEKLAELMGGHKAARTLREFLDAKYPTLL 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00439 951 MobiDBLite consensus disorder prediction 345 373 - -
Aip05g00439 951 PANTHER DNA REPAIR ENDONUCLEASE XPF 2 947 - -
Aip05g00439 951 MobiDBLite consensus disorder prediction 520 567 - -
Aip05g00439 951 MobiDBLite consensus disorder prediction 522 536 - -
Aip05g00439 951 SUPERFAMILY RuvA domain 2-like 882 946 IPR010994 -
Aip05g00439 951 Coils Coil 392 416 - -
Aip05g00439 951 MobiDBLite consensus disorder prediction 345 367 - -
Aip05g00439 951 Coils Coil 345 365 - -
Aip05g00439 951 Gene3D - 878 949 - -
Aip05g00439 951 SUPERFAMILY Restriction endonuclease-like 717 855 IPR011335 -
Aip05g00439 951 Pfam ERCC4 domain 723 852 IPR006166 GO:0003677|GO:0004518
Aip05g00439 951 Gene3D - 720 866 - -
Aip05g00439 951 SMART ERCC4_2 720 800 IPR006166 GO:0003677|GO:0004518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00439 K10848 - gmx:100812359 1488.01