Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00426 ATGGCCACATCATCAACAACAACCGCGTCTCTTGCCTTTCCCAAACCTCTTGTACCTTCTTCTCACGCTACAACATCTAATTTGTTCTTCCAACTCCGAACACAGAAGTACCAGAACCACCACAGAAGCAAATCTGAAATGAAGGCTCAAGTCCGTAAGGAAGATGTTGTTATCGTGGGTGCTGGCATTGCTGGCCTTGCAACTGCTGTCTCCCTTCACAGGCTTGGAGTTAATTCCCTCGTTCTTGAGCAGGCTGACTCCCTTCGAACCGGTGGCACTTCCCTCACCCTCTTCAAGAACGGCTGGAGGGTACTCGATGCTATTGGAATCGCTCATTATCTCAGACCTCACTTCTTGGAAATTCAAGGGATGGTGGTGAAGTCTGAGGATGGCAGAGAACTACGCTCTTTCACTTTCAAACAAGAGGATCAAAGCCAAGAGGTGCGAGCTGTGGAAAGGCGAGTACTTTTGGAAACTTTAGCTGCCCAGCTCCCCCAGGATATGATTCAGTTTTCTTCAAAGCTAGCAAGGATTGAATCAAATTCAGATGGAGAAACCTTGTTGGAACTTGCAGATGGGTCTAAGCTTCTTGCAAAGATTTTGATAGGTTGTGATGGGATTCGATCACCAATAGCAAAGTGGATGGGGTTTTCTGAGGCAAATTACGTTGGTCATTGTGCTTTCCGTGGACTTGCTTCTTATTCAGAAGGACAGCCTTATGGACCAAGAGTAAATTATATCTATGGTAGAGGGGTGCGTGCAGGATATGTTCCTGTTTCTCCAACAAAAGTTTATTGGTTCATCTGCTTTAACAGTTCATCCCCAGGTCCAAAAATAACTAATCCAACTGTTCTTAAGAAGGAAGCTAAAGAACTAGTCAAGAATTGGCCTTCGGAGCTTTTGGACATAGTGGACGCTACAGCCGACGAGACTGTCAGCAAGACTCCGCTGGTAGATCGGTGGCTTTGGCCGGCCGTAAGTCCACCTGCTTCTGCTGGTAAAGTGGTGCTGGTCGGAGATGCTTGGCATCCGATGACTCCGAATCTGGGGCAAGGAGCATGTTGTGCACTTGAGGATGCTGTGGTTCTTGCTAAGAAGCTTGCAGGGGCCATCAAGTCTAATGAGGACCACTCATCAGTTGAAGAAGCTTTGAGGTCATATGGCAGTGAAAGATGGCCCCGAGTGTTTCCACTCACTGTTCGTGCATACTTTGTGGGTTCCATATTGCAGTGGGAGAATCCATTGGTGTGTTCTGTTAGGAACAACATTGTCATACCTAAGTTAGTAAGGCTTGGACCATTGTTGGAGCATACAAATTTTACTCCTGAGAGTCTATGA 1338 0.4671 MATSSTTTASLAFPKPLVPSSHATTSNLFFQLRTQKYQNHHRSKSEMKAQVRKEDVVIVGAGIAGLATAVSLHRLGVNSLVLEQADSLRTGGTSLTLFKNGWRVLDAIGIAHYLRPHFLEIQGMVVKSEDGRELRSFTFKQEDQSQEVRAVERRVLLETLAAQLPQDMIQFSSKLARIESNSDGETLLELADGSKLLAKILIGCDGIRSPIAKWMGFSEANYVGHCAFRGLASYSEGQPYGPRVNYIYGRGVRAGYVPVSPTKVYWFICFNSSSPGPKITNPTVLKKEAKELVKNWPSELLDIVDATADETVSKTPLVDRWLWPAVSPPASAGKVVLVGDAWHPMTPNLGQGACCALEDAVVLAKKLAGAIKSNEDHSSVEEALRSYGSERWPRVFPLTVRAYFVGSILQWENPLVCSVRNNIVIPKLVRLGPLLEHTNFTPESL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00426 445 Pfam FAD binding domain 55 395 IPR002938 GO:0071949
Aip05g00426 445 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 55 77 - -
Aip05g00426 445 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 197 212 - -
Aip05g00426 445 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 332 347 - -
Aip05g00426 445 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 347 363 - -
Aip05g00426 445 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 38 442 - -
Aip05g00426 445 SUPERFAMILY FAD/NAD(P)-binding domain 55 423 IPR036188 -
Aip05g00426 445 Gene3D - 55 422 IPR036188 -
Aip05g00426 445 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 38 442 IPR044560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00426 Aip-Chr5 4820067 4821893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00426 54 424 Miscellaneous Gene Families AT5G05320 36.649 4.34e-82 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00426 - - gmx:100787671 676.011