Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00419 ATGGCGTCGGTACAACAAAGCACCTCTGCTTCCTCTAAAAGGTGGCTTCCTCTCGAAGCTAATCCTGATGTCATGAACCAGTTCCTATGGGGGCTTGGGCTTCCACAGGATGAAGCAGAATGCTGTGATGTTTATGGCTTAGATGATCAGCTTCTCGAAATGGTTCCTAAGCCTGTTCTTGCTGTTCTTTTCCTTTATCCTATAACCACTCAGACTGAAGAAGAGAGGTTGCAACAGGAACATGAAAAAAGGGAATATAGCAGTAAAGTGTATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGTACAGTAGGATTGCTTCATGCTCTTGGCAACCCCACGTCTGAGATTAAGCTTGTTGAGGGGTCATTCTTGGATAAGTTCTTTAAATCTACTGCAAGCATGGATCCAATGCAGCGTGCAAAATTCCTTGAGAATGATGGAGAAATGGAAGTTGCTCATTCAGTGGCAGCAAATGCTGGCGATACAGAGGCAGCAGATAATGCATATGCTCATTTTATCTGCTTTGCTTGTGTGGATGGTCAACTTTATGAGCTTGATGGAAGAAAGTCAGAGCCAATATCTCATGGTCCATCTTCGCCAAGTACTTTGTTGAAGGATGCAGCTAAAGTGATTAAGAGCATGATCCAGAAAAATCCAGACTCCATCAACTTCAATGTCATTGCTGTATCAAAGAAATCCAAGGATGGATTCTAA 717 0.4268 MASVQQSTSASSKRWLPLEANPDVMNQFLWGLGLPQDEAECCDVYGLDDQLLEMVPKPVLAVLFLYPITTQTEEERLQQEHEKREYSSKVYFMKQTVGNACGTVGLLHALGNPTSEIKLVEGSFLDKFFKSTASMDPMQRAKFLENDGEMEVAHSVAANAGDTEAADNAYAHFICFACVDGQLYELDGRKSEPISHGPSSPSTLLKDAAKVIKSMIQKNPDSINFNVIAVSKKSKDGF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00419 238 SUPERFAMILY Cysteine proteinases 13 232 IPR038765 -
Aip05g00419 238 CDD Peptidase_C12_UCH_L1_L3 15 229 - -
Aip05g00419 238 Gene3D - 9 233 IPR036959 GO:0004843|GO:0006511
Aip05g00419 238 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 17 34 IPR001578 GO:0004843|GO:0006511
Aip05g00419 238 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 55 67 IPR001578 GO:0004843|GO:0006511
Aip05g00419 238 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 95 112 IPR001578 GO:0004843|GO:0006511
Aip05g00419 238 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 167 178 IPR001578 GO:0004843|GO:0006511
Aip05g00419 238 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 183 193 IPR001578 GO:0004843|GO:0006511
Aip05g00419 238 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 15 216 IPR001578 GO:0004843|GO:0006511
Aip05g00419 238 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10 236 - -
Aip05g00419 238 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10 236 IPR001578 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00419 Aip-Chr5 4734167 4736553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00419 K05609 - gmx:100527718 397.512