Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00393 ATGGGAAAGAGAACGAAACCAGTTTCAGAGTATCTAAATGCTCTCTCATTGTTTTGTTTATATGTCAGAGTAGTGATTTCTGCAAAGCACAACACTGGAGCAGGTGTAGTCCCAGGCAAAATCAATGTTCATCTTGTTCCACATTCCCATGATGATGTTGGTTGGCTCAAAACTGTTGACCAATACTATGTTGGGTCAAACAAAACTATTCAGGTGGCATGTGTTGAGAATGTGCTGGACTCTGTGGTTATGTCACTGCAGAAGGACCCAAATAGGAAATTTGTGTTTGCTGAAATGGCATTTTTCAATAGATGGTGGGTAGAACAAAATCAAGAGACACAAGCAATAGTGAGAAAGCTTGTGGATGCAGGGCAGCTAGAATTCATAAACGGTGGTTGGTGCATGCATGATGAAGCAACCACCCATTACATAGACATGATTGATCAAACTACATTTGGTCATCTCTTCATCAAGAAACACTTCAACAAGGTCCCTCGAGCCGGGTGGCAGATTGATCCATTTGGGCATTCTGCTGTTCAAGCTTATCTCCTTGGTGCTGAGCTTGGGTTTGAATCTGTACACTTTGCTAGGATTGATTATCAGGATAGAGATAAGCGAAAAGTTGATAAATCTCTCGAAGTTGTGTGGCGTGGATCCAAAACATTTGGATCTTCAGCACAGATTTTTGCCAATGCTTTTCCGGTTCATTATAGTCCACCAGCAGGTTTTCATTTTGAAATCGACGATACGTATGATCCCATCCAGGATGATCCTCATCTATTTGATTACTATGTTAAAGATCGAGTTGAGGACTTCATTGCTGCTGCTGTTGCACAAGCAAATGTGACTAGAACAAACCATATTATGTGGACAATGGGCGATGATTTCCAATACCAATATGCAGAAACTTGGTTCAAGCAAATGGATAAACTAATTCACCATGTTAATAAGGATGGCAGAGTGAATGCTTTGTATTCTACACCATCACTTTACACTGATGCTAAAAATGCAGCAAACCAATCATGGCCTCTGAAAACTGATGATTACTTTCCCTATGCAGATAGAGTAAATGCTTATTGGACAGGATATTTCAGCAGTCGCCCTGCATTTAAGAGATATGTTAGAATGCTGAGTGCATACTATTTGACAGCGCGTCAACTTGAATTCTTGGCTGGAAAGAAAACCACAGTAAGCCACACTTATGACCTTGGAGATGCTCTAGCAATTGCACAGCATCATGATGCTGTTTCTGGTACTGCCAAGCAGCATACAACTAATGACTACATGAAAAGGCTTGCTATTGGAGCATCTAAGGCTGAAGCTGTCATTAGTTCTTCTTTGGCTAATCTTGCTAGCAAGAATCCTGGAGTTCATCGCTCAACACCTGCATCGGTATTTTCCCAGTGTCAACTACTCAATATCAGTTACTGCCCACCAACTTCAGACAATAATCTTCAAGGAAAAAGTTTGGTGTTATTGGTATATAATCCACTTGGATGGAATCGTTCTGATATTATCAGAATACCAGTTAATGATGCTAATCTTGTTGTCGAAGATTCGTTTGGGAATAAGGTGTCAGTGCCTCCTCTTGGATGGACTACATACTTCATTTCTAGAGCACCGGGAAAAGTCAAAGGTAGAAATGGATTTGTCTCATCACATTCAATCATTCAGAAAAACAAGACCATTGAATTAGGACCCGGAAATTTGAAGATGTCCTTTTCTTCCGAGTCTGGAAAACTTGAAAGGATGTATAATTCCAGAACTGGAGTTGATATACCAATTCAGCAAAGCTATCTCTGGTATGGCTCTAGCGACGAGTCGGATCAGGCTTCTGGTGCATATATATTCCGGCCTAATGGATCCTCTCCAAAGATTGTTTCAAGATCAGTGTCCTACAAGGTAGTTCAAGGACCACTAGTTCATGAGGTACATCAGAATATTAGTTCTTGGATTTACCAGGTCACTAGGCTCTATAGAGATAAAGAGCATGCTGAAGTTGAATACACTATTGGTCCAATTCCCACAGATGATGAAGTTGGGAAAGAGGTGATCACACAAATGACATCAAATATGGTTACAAACAAGGAATTTTATACTGATTCTAATGGAAGAGATTTTCTCAAACGGGTTCGAGGTTATAGGGAAGATTGGCCCCTTGAAGTTAATCAACCTGTAGCAGGAAACTATTATCCACTTAATTTAGGAATTTATATTAAGGATAAGAAGTCTGAATTCTCAGTCCTAGTTGATCGTGCCACTGGTGGCGCGAGCATTAGAGATGGTGAGGTGGAACTAATGCTTCATAGGCGCATGCTCACCGAGGATGGCAGAGGAGTAGGCGAATCACTTGATGAACAAGTTTGCATAGATGATAAATGCCAAGGGCTAACAGTAAGAGGAAACTATTACATGGGCATCCACAAACTAGGAGATGGTTCCCGCTGGCGCCGTTCAACTGGTCAGGAAGTTTACTCCCCGCTCTTATTGGCTTTTACACATGAGAACATAGGAAATTGGAAGTCCTCATATTTGAGCAAAGGAACTGTGATGGACCCAAATTACAGCTTGCCTCCCAATGTTGCTTTGATAACTCTTGAGGTACACTTAGCTACAATAGTTTTCTGCTCTTGCATTGCACCCGTGCGCGCGCGCTCTCTTACTCAATGCATTTTGCAGGAATTGGATGATGGCAGTGTGCTCCTCCGTTTGGCACATCTATATGAGCAAAGTGAAGATGCTCACTATTCAAGTTTGGCTAAAGTTAAATTGAAGAGAATGTTTGCCTCAAAAAAGATAAAGGAATTAAAGGAGGTTAATTTATCAGCAAACCAAGAGAAGTCAAACATGAAGAAGAAGATATGGAAGGTTGAGGGCGACAAGGGGCAACAACCACCACCACTTAAAGGTGGACCTGTTAACAGTTTCCATCTTCTTGTTGAGCTTGGCCCCATGGAAATACGTACATTCCTCTTGAAATTTTGA 2985 0.4117 MGKRTKPVSEYLNALSLFCLYVRVVISAKHNTGAGVVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNKTIQVACVENVLDSVVMSLQKDPNRKFVFAEMAFFNRWWVEQNQETQAIVRKLVDAGQLEFINGGWCMHDEATTHYIDMIDQTTFGHLFIKKHFNKVPRAGWQIDPFGHSAVQAYLLGAELGFESVHFARIDYQDRDKRKVDKSLEVVWRGSKTFGSSAQIFANAFPVHYSPPAGFHFEIDDTYDPIQDDPHLFDYYVKDRVEDFIAAAVAQANVTRTNHIMWTMGDDFQYQYAETWFKQMDKLIHHVNKDGRVNALYSTPSLYTDAKNAANQSWPLKTDDYFPYADRVNAYWTGYFSSRPAFKRYVRMLSAYYLTARQLEFLAGKKTTVSHTYDLGDALAIAQHHDAVSGTAKQHTTNDYMKRLAIGASKAEAVISSSLANLASKNPGVHRSTPASVFSQCQLLNISYCPPTSDNNLQGKSLVLLVYNPLGWNRSDIIRIPVNDANLVVEDSFGNKVSVPPLGWTTYFISRAPGKVKGRNGFVSSHSIIQKNKTIELGPGNLKMSFSSESGKLERMYNSRTGVDIPIQQSYLWYGSSDESDQASGAYIFRPNGSSPKIVSRSVSYKVVQGPLVHEVHQNISSWIYQVTRLYRDKEHAEVEYTIGPIPTDDEVGKEVITQMTSNMVTNKEFYTDSNGRDFLKRVRGYREDWPLEVNQPVAGNYYPLNLGIYIKDKKSEFSVLVDRATGGASIRDGEVELMLHRRMLTEDGRGVGESLDEQVCIDDKCQGLTVRGNYYMGIHKLGDGSRWRRSTGQEVYSPLLLAFTHENIGNWKSSYLSKGTVMDPNYSLPPNVALITLEVHLATIVFCSCIAPVRARSLTQCILQELDDGSVLLRLAHLYEQSEDAHYSSLAKVKLKRMFASKKIKELKEVNLSANQEKSNMKKKIWKVEGDKGQQPPPLKGGPVNSFHLLVELGPMEIRTFLLKF 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00393 994 PANTHER ALPHA-MANNOSIDASE 524 868 - -
Aip05g00393 994 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 894 991 IPR041147 -
Aip05g00393 994 SUPERFAMILY Glycoside hydrolase/deacetylase 34 354 IPR011330 GO:0005975
Aip05g00393 994 Gene3D Glycoside hydrolase family 38, central domain 322 400 IPR037094 GO:0004559|GO:0006013
Aip05g00393 994 Gene3D - 468 527 IPR013780 -
Aip05g00393 994 Pfam Glycosyl hydrolases family 38 C-terminal domain 566 778 IPR011682 GO:0004559|GO:0006013
Aip05g00393 994 Gene3D - 849 994 - -
Aip05g00393 994 PANTHER ALPHA-MANNOSIDASE 891 994 - -
Aip05g00393 994 PANTHER ALPHA-MANNOSIDASE 524 868 - -
Aip05g00393 994 SMART Alpha_mann_mid_2 358 432 IPR015341 GO:0004559|GO:0006013
Aip05g00393 994 CDD GH38N_AMII_LAM_like 41 317 - -
Aip05g00393 994 Gene3D Glycoside hydrolase family 38, central domain 401 455 IPR037094 GO:0004559|GO:0006013
Aip05g00393 994 Gene3D - 563 826 - -
Aip05g00393 994 PANTHER ALPHA-MANNOSIDASE 22 525 - -
Aip05g00393 994 Pfam Alpha mannosidase middle domain 358 450 IPR015341 GO:0004559|GO:0006013
Aip05g00393 994 SUPERFAMILY Galactose mutarotase-like 465 994 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aip05g00393 994 Pfam Glycosyl hydrolases family 38 N-terminal domain 42 353 IPR000602 GO:0004559|GO:0006013
Aip05g00393 994 SUPERFAMILY Families 57/38 glycoside transferase middle domain 357 452 IPR028995 -
Aip05g00393 994 Coils Coil 933 953 - -
Aip05g00393 994 PANTHER ALPHA-MANNOSIDASE 22 525 - -
Aip05g00393 994 Gene3D Glycoside hydrolase 38, N terminal domain 41 321 IPR027291 -
Aip05g00393 994 PANTHER ALPHA-MANNOSIDASE 891 994 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00393 Aip-Chr5 4405975 4412126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00393 12 941 Glycoside Hydrolase AT3G26720 55.465 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00393 K01191 - gmx:100806748 1502.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00393 05 4405975 4412126 Aip05g00393 05 4405975 4412126 ECH