Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00388 ATGGGGTGCTGCCATTCGAGGATAGAAAGAGAAGAGACAGTGTCACGTTGCAAATCAAGGAAGCGTTACATGAAACAGTTTGTTCAAGCAAGACACGCTTTTTCCGCTGCGCATGTTATGTACATTCGTTCGCTTCGTGCCACTGGTTCTGCTTTGCTTCAGTTCGCAAACGCCGAAACTGAAACCGTTTACTTACTACTCCTTCCTCCTCCTCAAAAACAAAAGTACCATTCCCAACCACTCCTTTTACCTCTTCCCCTTCCCCTTTCTCTTCTTAAGAAGAAAATGGGGTGCTGCCATTCGAGGATAGAAAGAGAAGAGACAGTGTCACGTTGCAAATCAAGGAAGCGTTACATGAAACAGTTTGTTCAAGCAAGACACGCTTTTTCCGCTGCGCATGTTATGTACATTCGTTCGCTTCGTGCCACTGGTTCTGCTTTGGCAAACGCCGAAAACGCCGAAACTGAAACCGTTAGCGAGCTTGCAATGGTGGTTTCAAGAAACACGAAAGATCTGGTTGAAGTTATAAAGGAGCTTGATGAGTATTTTCTCAGAGCCGCTGATTCTGGTTCACAAGTTTCGTCGCTGCTTCAAGTTCCAAGTTCTGGTTTTTCTCATCAGAACAAAGGAAGTAAAGTGTATGGTTATGGATGGCCGTCGCTATTGACATGGAGTTCGAGTCCGAAGCTGAATGGATTTGGCAAGTTGGCTGAGGAAAATCCTCTTTCTGTGGGTGGTTTTGGGGGTAATACTGTTGGCAGTGGCGGCGGCGGCAGTGGTGGTCACTGCTCAACTGTGGAGAGGTTATATGCATGGGAGAAGAAATTGTACCAAGAGGTTAAGAATGCTAAGATAATAAAGATGGAACATGAGAAGAAGGCAGCACAGCTAAGGAAGTTTGAGTTGAAGAGGGCTGACTATGTGAAGACGGAAAAGACGAAGAAAGAGGTCGAGAAGTTAGAATCGCAGATGATGGTTGCCTCGCAGGCCATTGAAACCACCTCCTCCGAAATCATCAAATTAAGAGAAATAGAGCTCTGCCCTCAACTCATTGATCTTGTCAAAGGATTGATGTGCATGTGGCGGAGCATGTATGAATGCCATCAAGTTCAAAAGCACATAGTTCAGCAGCTGGAATACATCAATACCATACCATCGACTACCCCAACGTCCGAGATTCATCGGCAGTCGACTCTTCAGCTTGAGGTTGAAGTACAGCAATGGCACCAATCCTTCTGCAACCTCTTCAAGGCTCACAGAGATTACATCCAATCCCTCACAGGCTGGCTAAGGCTCAGCCTTTTCCAGTTTGGCCGAACCCCACTGAGCAGAACTACCGAGGAGTCAAAGATATATGCCCTCTGTGAAGAATGGAACCTTGCTGTTGATCGCATACCGGACAAGGTCGCATCTGAAGGAATTAAAAGCTTGTTGACTGTTATTCATGCAATTGTAGTTCAACAGACAGAGGAGCATAAACAAAAGAAGAGGTCAGATTCTGCATTCAAAGAGCTCGAGAAGAAGGTTGTTCAGCTTCGATCTCTTGAGTGCAAATATGGTCCATACTCCATTTCAGAGTCCTCTGGTACCATGCGGACCAAGGACCCCGTCAGCCAGAAGCGTGCTAAGGTGGAATCTTTGAGAGCGAAGGCCGAAGAAGAGAAGACTAAACATGAAAAGGCAGTGAGCGTAACACGGGCGATGACATTGAACAACTTGCAGATGTCATTCCCCCATGTTTTTCAGGGAATTGTGGGATTTTCAAATTTGTGCACTGAGGTTTTTGAGTCTGTATACAACAAGGCCAAAGCTGTTGGACAGGAACATGAATTGAAAAGAATATTGCCATAG 1851 0.4571 MGCCHSRIEREETVSRCKSRKRYMKQFVQARHAFSAAHVMYIRSLRATGSALLQFANAETETVYLLLLPPPQKQKYHSQPLLLPLPLPLSLLKKKMGCCHSRIEREETVSRCKSRKRYMKQFVQARHAFSAAHVMYIRSLRATGSALANAENAETETVSELAMVVSRNTKDLVEVIKELDEYFLRAADSGSQVSSLLQVPSSGFSHQNKGSKVYGYGWPSLLTWSSSPKLNGFGKLAEENPLSVGGFGGNTVGSGGGGSGGHCSTVERLYAWEKKLYQEVKNAKIIKMEHEKKAAQLRKFELKRADYVKTEKTKKEVEKLESQMMVASQAIETTSSEIIKLREIELCPQLIDLVKGLMCMWRSMYECHQVQKHIVQQLEYINTIPSTTPTSEIHRQSTLQLEVEVQQWHQSFCNLFKAHRDYIQSLTGWLRLSLFQFGRTPLSRTTEESKIYALCEEWNLAVDRIPDKVASEGIKSLLTVIHAIVVQQTEEHKQKKRSDSAFKELEKKVVQLRSLECKYGPYSISESSGTMRTKDPVSQKRAKVESLRAKAEEEKTKHEKAVSVTRAMTLNNLQMSFPHVFQGIVGFSNLCTEVFESVYNKAKAVGQEHELKRILP 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00388 616 PANTHER UNCHARACTERIZED 156 601 - -
Aip05g00388 616 PANTHER UNCHARACTERIZED 96 155 - -
Aip05g00388 616 Coils Coil 310 337 - -
Aip05g00388 616 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 156 601 - -
Aip05g00388 616 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 96 155 - -
Aip05g00388 616 Pfam Protein of unknown function (DUF632) 172 482 IPR006867 -
Aip05g00388 616 Coils Coil 537 561 - -
Aip05g00388 616 Pfam Protein of unknown function (DUF630) 96 149 IPR006868 -
Aip05g00388 616 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Aip05g00388 616 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 67 - -
Aip05g00388 616 PANTHER UNCHARACTERIZED 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00388 Aip-Chr5 4356778 4363916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00388 1 59 Acyl Lipid Metabolism Gene Families AT2G27090 38.983 1.16e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00388 - - aip:107639991 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00388 05 4356778 4363916 Aip05g00388 05 4356778 4363916 ECH