Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00385 ATGGCTTCTTCCACCGCCACCCAATTCTCCCTTTCCCTCTCCGCCAAACACGCAGCCCCAACAACAGCCTCCAAGCTACCCACTCGTGTCTCCTCGCTTCAAAAACCGAACTTGGTGCCACCCCACTTCGGATTACGATGTTCTCACAGTCAAAGTGTCCCTCTTTCGAAATCAAGGATTTGCGCTAGCTCAGCTCAAGTTATGGATCCCGTCACTTCAAAGAATGAACCCACCATCGTTGACGTCGATTTGGGCAACCGCAGCTACCCCATTTATATTGGATCCGGCTTGCTCCACAAACCCGAGCTTCTCCAGAGGCATGTCCATGGAAAGAGGGTTCTTGTGGTCACTAATAACACGGTTGCACCATTGTATCTAGACAAGGTCATTGATGCTTTAACAAAGGGAAACCCAAACGTTTCAGTCGAGAGTGTAATTTTGCCGGATGGCGAGCAGTACAAGGACATGGATACGCTTATGAAAGTCTTTGACAAGGCCATCGAGTCACGGTTGGACCGACGCAGTACATTTGTTGCCCTTGGAGGAGGTGTGATTGGAGACATGTGTGGCTATGCTGCTGCTTCCTTTCTACGGGGTGTTAATTTTATTCAGATTCCTACCACTGTTATGGCTCAGGTTGATTCATCAGTTGGTGGTAAAACTGGGATAAATCATCGTCTTGGAAAGAATCTAATTGGTGCATTTTACCAACCCCAATGTGTGCTTATTGACACAGACACATTGAATACGTTGCCAGATAGGGAACTAGCATCAGGTTTTGCAGAGGTTATAAAGTATGGGCTTATTAGGGATGCAGAATTTTTTGAGTGGCAAGAGAAAAATATGCAGGCATTAATGGCAAGAGATCCTGCGGCACTGGCATATGCTATAAAGCGATCATGTGAAAACAAGGCTGAGGTTGTCTCCTTAGATGAGAAGGAAAGTGGAATGAGAGCAACGTTAAACCTGGGCCATACATTTGGTCATGCAATAGAAACTGGAGTTGGCTATGGGAAGTGGCTTCATGGAGAGGCTGTTGCAGCTGGCACGGTAATGGCTGTTGACATGTCATATCGCTTAGGTTGGATTGATGATTCGATTGTTGATAAAAAGGTAGCAGATGGGTTGCTAAGACTTATCCTTCTGAAGGGTCCTCTGGGCAATTGTGTCTTCACCGGGGACTATGATAGAAAGGCACTAGATGATACTCTTCATGCATTCTGTAAATCCTGA 1233 0.4623 MASSTATQFSLSLSAKHAAPTTASKLPTRVSSLQKPNLVPPHFGLRCSHSQSVPLSKSRICASSAQVMDPVTSKNEPTIVDVDLGNRSYPIYIGSGLLHKPELLQRHVHGKRVLVVTNNTVAPLYLDKVIDALTKGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRSTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGFAEVIKYGLIRDAEFFEWQEKNMQALMARDPAALAYAIKRSCENKAEVVSLDEKESGMRATLNLGHTFGHAIETGVGYGKWLHGEAVAAGTVMAVDMSYRLGWIDDSIVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLHAFCKS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00385 410 Hamap 3-dehydroquinate synthase [aroB]. 77 408 IPR016037 GO:0003856|GO:0005737|GO:0009073
Aip05g00385 410 Gene3D - 251 369 - -
Aip05g00385 410 TIGRFAM aroB: 3-dehydroquinate synthase 89 371 IPR016037 GO:0003856|GO:0005737|GO:0009073
Aip05g00385 410 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 77 368 - -
Aip05g00385 410 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 368 406 - -
Aip05g00385 410 CDD DHQS 88 404 - -
Aip05g00385 410 Gene3D - 66 250 - -
Aip05g00385 410 SUPERFAMILY Dehydroquinate synthase-like 82 392 - -
Aip05g00385 410 Pfam 3-dehydroquinate synthase 145 370 IPR030960 -
Aip05g00385 410 PANTHER 3-DEHYDROQUINATE SYNTHASE 77 368 - -
Aip05g00385 410 PANTHER 3-DEHYDROQUINATE SYNTHASE 368 406 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00385 K01735 - pvy:116108339 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00385 05 4341328 4344068 Aip05g00385 05 4341328 4344068 ECH