Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00380 ATGACTATTTCCGAAGACAAGGACGAAACCTTAGCTCACTTTCTCGAATCGGAGGTTCTCTCCGAAACCTCTGACCAGGAGGAGGAGAATCCGGAGGAGCCTGAACCAAAGAGAAAGAGGGTAGATGAGGCGGAGAGTTCTAAGGAAGGTGCCAAACAAAGTTTAAGTTCAAATTCATTGTTGGAGCCGAAGAATTACAGTGTGAATAATGTAGTGGTGCCGAAGAGGATTGAGACCGGTTCTTTCAGCAAAGTCCCACCTGAGCTCTTTCACCATATCCTTAAATTCCTGTCCTCAGAGGACCTTATTTCTTGTTCCTTGGTCTGTAGGTTTCTAAATTATGCAGCATCCGATGAAGCATTGTACTGTATGCAATGGGGTCTTCTTCCCCCTACAAGAAAGTTAAGGGAATGTCCATGGAAAAAGTTATATATTCAGGATATGGTTGAACTTGTCAGAAACTGCCAAAATGAGTTTAAGGAGTATTACATTCAAATGCAAGCAGCTAAGCGGAGTCAAGCCCCTCATCCTTCGCAGGTGAAGGACGACAGAATAATCCTTGACAAAACATTAGCTGATCAAGTGTCATCATGGAAAAGCAGCAAGGGACTCAGCGATGCAGTGGTAACTGATCATGCTTGTTCTGGGGAAACATGCTCTTACTATGAAATCGGAGATGTATTTATTTGTGAGAAGACCGGGCAAGTTCATGTTTGTGATGAGACTTGTAGAGAAGTAATCATGGATCCCACCAATGAGCTTTTGGTCTGTACAATATCAGGGCACTGTTTCGATAGATTTCTGTCACCGTCCGAGATGGAGCCGGATACTGAACAGCAGCAAGGTGGTGCAACTGATGAGGCAGAACCATTTATGGGGTCGGGCCGTTTTGCAAGAGCTTATTCGCTGGGATACAATTGTGCTGATGAGAAGGAGCTGGCAGCAACTTTAAGGTTTTGCTGA 963 0.4455 MTISEDKDETLAHFLESEVLSETSDQEEENPEEPEPKRKRVDEAESSKEGAKQSLSSNSLLEPKNYSVNNVVVPKRIETGSFSKVPPELFHHILKFLSSEDLISCSLVCRFLNYAASDEALYCMQWGLLPPTRKLRECPWKKLYIQDMVELVRNCQNEFKEYYIQMQAAKRSQAPHPSQVKDDRIILDKTLADQVSSWKSSKGLSDAVVTDHACSGETCSYYEIGDVFICEKTGQVHVCDETCREVIMDPTNELLVCTISGHCFDRFLSPSEMEPDTEQQQGGATDEAEPFMGSGRFARAYSLGYNCADEKELAATLRFC 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00380 320 MobiDBLite consensus disorder prediction 31 49 - -
Aip05g00380 320 SMART fbox_2 85 124 IPR001810 GO:0005515
Aip05g00380 320 MobiDBLite consensus disorder prediction 270 290 - -
Aip05g00380 320 Gene3D - 67 169 - -
Aip05g00380 320 PANTHER F-BOX ONLY PROTEIN 3 72 263 - -
Aip05g00380 320 PANTHER F-BOX ONLY PROTEIN 3 264 320 - -
Aip05g00380 320 MobiDBLite consensus disorder prediction 15 57 - -
Aip05g00380 320 Pfam UL92 family 218 282 IPR004289 -
Aip05g00380 320 SUPERFAMILY F-box domain 76 146 IPR036047 GO:0005515
Aip05g00380 320 ProSiteProfiles F-box domain profile. 79 125 IPR001810 GO:0005515
Aip05g00380 320 Pfam F-box domain 82 123 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00380 Aip-Chr5 4251356 4253894 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00380 - - gmx:100778591 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00380 05 4251356 4253894 Aip05g00380 05 4251356 4253894 ECH