Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00378 ATGGATGGAGAAGAAGGAGGAGGCATAAGGCTGAGCAAGAGGTTCAACGACAACGGCGGCGCCGGCGCCGGCGGCGAGGTCGACTACAAGACCAAATCTGGAACCGCGTGGAGCCACTCTTACCTGAACCAGAAGCCATGGCACCCTCTCTCTTACCCGAACCAGCGCCGCAAGTGGATCGCCGAGCAGACCCACGCCCACCGCCAGCGACGTTCCGAAGAGGTGGCGCGTGAGTACGCTCAGGAGCAAGAGTTCTTCCGCCAGACCAATCTCATCTCCAAGAAAGACAAGGAAAAGGTGGAGTTGATGCAAGCTGTTAGCTTTATGTATGTTCGTCCTCCTGGTTACAACGCTGAGGCTGCCAAAGCTGCCGAGTTAGCTGATGAGAAGAGAAAAGAGGAATTGAGTAATGGTGCTGGAGGACCCTCATCCTCTTCACTGCCACCGAGTTCTTTGCCCGACAAGGATCATTTAGGTGAAGAGAAGAAGAAGAAACCAAGGCCTAAAGATGTTTTTGGTCGCCCTCTGCCAACCGAAGAAGAATTTGAGATTCTGAAAAATGCACCAAAGCTGGAAACAGGAGTTGCTGGTAGGGTGAAACCTTTTGGAGTTGAGGTTCGCAATGTAAAATGTTTAAGATGTGGGAACTACGGCCATCAAAGTGGTGATCGTGAATGTCCCTTGAAGGATGTTATAATGCCTAATGAAGAGAGCAGATTGAAAAGAGATGACCCCTTGAATGCTATCCTTGCGCACACAGACCCTACTGAGCCTCTAAAATGGGAGCTCAAGCAGAAGCCAGGAATCAGTCCTCCTCGAGGAGGGTTCAAACCGGATGATCCCAACCAGCAGATTGTTGCTGAGGAAATATTTGACGAGTATGGAGGTTTTCTTGGTATGGATAGTATCCCTGATTTGTTGACCAACTTCTCTAAGAAACCAAAGAAGTCCAAAAAGAGCAAGAGTAAGAATCAGCAACTAAATTCTGGAAGTGAGGGATCTCTAGATGATGGAGAGAAGAGATCAAAGAAGGTAAAGCTAAACAAAAAGAAGAAAAATCATGTGTCAAGTTCGGCAGACACTTCAGATTATGAAAAGGATCGAAGAAAGAGCAGACGCAAGAGTTCTTATTCTTTAGAAGATTCTGACAGGGACAAGTTTGACCATAGCAAAAGGACTAAACATGAGATGCCCAAAGGTTCTTCTCGTCATAGTCATAAGAGTAAACATGACAGACAAAGGCATTCTTATTCAAGTGAAGATTATGACAGTGACAGGGATGACCAAAGTAGAAAGAATATACAAAATCATAATAGGAAACATGGTAGAAAAAGACATTATTATTCATCTGAGGATTCGAAAAATAGTGAGAAGCATTGTTCATCTGATGATTCGGACAGCGACAGAGATGATAAAAGGAGAAAGATTATACAAAAGCATAAGAGAAAACATAGCAGAAAAAGGCATTCTAATTCATCGGAGGACTCTGGTCCTGACGATCATCATGGAAATGACAAGAGTAGGGACAAGAATTCAAACTCCTCGGATGATTCTAATCATAGAAAGTGCAACCATAGGAAGTCTTCAGCAGCCGATCGAGATTCCCAAAAGCACAACAGAAATGATGATTTTGATCCCTACTGCGGAAAACAGAAGAACATATCTAGGAATTCATATTCATCTGAAGATTCAGATGTTGACACAGTTGATCGGAGTAGAAAGATCGAACAAAAGGATCGCTATATACCCGAGGGTTCTGAACATCCTAGGCGCGATGTGAGTAGGGAGAGAAGAAAAAAGGATTACTATTCATCTAAGGATTCTGGTGCTGACAGGTATCACAGATATGAACATTCTTATTCATCTGAATCTGATAGTTATCATCATCAGAGGCATTTGAGAAGGCAAGGTCATAAGCACCGGTAA 1926 0.4408 MDGEEGGGIRLSKRFNDNGGAGAGGEVDYKTKSGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHAHRQRRSEEVAREYAQEQEFFRQTNLISKKDKEKVELMQAVSFMYVRPPGYNAEAAKAAELADEKRKEELSNGAGGPSSSSLPPSSLPDKDHLGEEKKKKPRPKDVFGRPLPTEEEFEILKNAPKLETGVAGRVKPFGVEVRNVKCLRCGNYGHQSGDRECPLKDVIMPNEESRLKRDDPLNAILAHTDPTEPLKWELKQKPGISPPRGGFKPDDPNQQIVAEEIFDEYGGFLGMDSIPDLLTNFSKKPKKSKKSKSKNQQLNSGSEGSLDDGEKRSKKVKLNKKKKNHVSSSADTSDYEKDRRKSRRKSSYSLEDSDRDKFDHSKRTKHEMPKGSSRHSHKSKHDRQRHSYSSEDYDSDRDDQSRKNIQNHNRKHGRKRHYYSSEDSKNSEKHCSSDDSDSDRDDKRRKIIQKHKRKHSRKRHSNSSEDSGPDDHHGNDKSRDKNSNSSDDSNHRKCNHRKSSAADRDSQKHNRNDDFDPYCGKQKNISRNSYSSEDSDVDTVDRSRKIEQKDRYIPEGSEHPRRDVSRERRKKDYYSSKDSGADRYHRYEHSYSSESDSYHHQRHLRRQGHKHR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00378 641 MobiDBLite consensus disorder prediction 257 285 - -
Aip05g00378 641 MobiDBLite consensus disorder prediction 305 641 - -
Aip05g00378 641 MobiDBLite consensus disorder prediction 154 179 - -
Aip05g00378 641 MobiDBLite consensus disorder prediction 489 549 - -
Aip05g00378 641 MobiDBLite consensus disorder prediction 122 179 - -
Aip05g00378 641 SMART Cir_N_3 46 82 IPR019339 -
Aip05g00378 641 MobiDBLite consensus disorder prediction 563 630 - -
Aip05g00378 641 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 47 82 IPR019339 -
Aip05g00378 641 MobiDBLite consensus disorder prediction 445 474 - -
Aip05g00378 641 MobiDBLite consensus disorder prediction 396 412 - -
Aip05g00378 641 PANTHER CBF1 INTERACTING COREPRESSOR CIR 10 454 IPR040014 GO:0003714
Aip05g00378 641 MobiDBLite consensus disorder prediction 353 395 - -
Aip05g00378 641 MobiDBLite consensus disorder prediction 1 27 - -
Aip05g00378 641 MobiDBLite consensus disorder prediction 413 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00378 Aip-Chr5 4240338 4243655 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00378 K06066 - gmx:100788280 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00378 05 4240338 4243655 Aip05g00378 05 4240338 4243655 ECH