Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00343 ATGGCTATGGCTACAAATGAAGCTAATAAGAAAACAATGGAAATAAGTTCAGCACCAATAACACCAAGAACAAGGACACCAATGGTGTCATCACCACCAGTTTCATGTCCACCCTCTCAGATTCACTCACCATCACTAACAAGGTCACCACTTCTGCATTCAGAGAATGGAGATGAAGTAGATGGGATTACAACAAGTAAAACAAAGACACCAAAGACACCAAGAACACCAAGAACACCAAGAACACCATTAAGGATCTCAAATTTGACACCAAGGTTTATCACACCTTTGGGAAGCCCTGTGAGGAAAGCACTCAGGTTCACAAAGCTTGATCCTCATGATGCTTGGCTTCCAATCACTCAATCAAGGAATGGAAACAAGTTCTATGCTGCTTTTCATACTCTTTGTTCTGGGATTGGAATTCAGGCTCTTATTCTTCCTTTCTCCTTCACTGTTCTTGGTTGGACATGGGGAATAATCAGTTTGAGTGTAGCTTTTGTATGGCAATTATACACTCTATGGTTGTTGGTGCATCTTCACGAATCTGTGGAGCATGGAATTCGTTTCAGTCGATACCTTCAACTCTGTTTTGCTACATTTGGGGAGAGACTGGGAAAAGTGCTAGCAATGTTTCCAATAATATACCTATCAGCAGGGACATGCACAACCATAATAATATTGGGAGCATCAACAGCAAGAACATTCTACCAAATCATATGCGGGACCACGTGCACCGCAAAGCCCATGACCACAGTAGAGTGGTACCTAGTGTTCACATGTGTGGCAGTGGTGTTGTCCCAGTTGCCAAGTTTGAACTCCATTGCTGGGGTTTCACTCATTGGTGCTGTCACTGCTGTAGGGTATTGTACCGCCATTTGGATCACCTCTGTTGCTCAGGGTACCCTACCTCGTGTTAACTATAATCCTGTTAGGCATGGAACCAGTGCTAAGGATGCTTTTAATATTCTTAATGCACTTGGGATTGTTGCCTTTGCTTTTAGGGGACATAATCTCATCCTCGAAATTCAGGCCACTATGCCTTCAAGCGAGAAGCATCCATCGCACGTGCCAATGTGGAAAGGAGTGAAGGCTTCATACGCACTCATTGCTGCATGCTTATTTCCCCTATCCATTGGCGGCTATTGGGCTTATGGCCAAATGATTCCTTCGGGAGGAATGCTGACTGCACTATACATGTTCCATTCTCATGACGTATCAAGATTTGTGCTGGGATTGACGAGTTTATTCGTAGTAATCAATGGTTTGTGCTCATTCCAAATCTATGGCATGCCGGTTTTTGATGACATGGAATCAAATTACGTAAAGATGAAGAAGCAGCCGTGCCCATGGTGGCTGAGGGTAATTTTCAGGATCTTCTTTGGGTTTATCTGCTTCTTCATTGCTGTTGCAATTCCATTCTTGTCAAGCTTGGCAGGTTTGATTGGAGGAATTTCATTGCCTGTGACATTGGCATACCCTTCCTTCATGTGGCTCAAGTTTAAGAAGCCCAAGAAATTTGGTCCTTCTTGGTGTATCAATTGGTTCTTGGGGATCTTAGGGATGTGCCTTAGTGCCCTTCTTGTTGCAGCTAGCATCTATGTTATTGTTGATACTGGTGTTAATGTTAGCTTCTTCAATCCTAAGTAA 1647 0.4329 MAMATNEANKKTMEISSAPITPRTRTPMVSSPPVSCPPSQIHSPSLTRSPLLHSENGDEVDGITTSKTKTPKTPRTPRTPRTPLRISNLTPRFITPLGSPVRKALRFTKLDPHDAWLPITQSRNGNKFYAAFHTLCSGIGIQALILPFSFTVLGWTWGIISLSVAFVWQLYTLWLLVHLHESVEHGIRFSRYLQLCFATFGERLGKVLAMFPIIYLSAGTCTTIIILGASTARTFYQIICGTTCTAKPMTTVEWYLVFTCVAVVLSQLPSLNSIAGVSLIGAVTAVGYCTAIWITSVAQGTLPRVNYNPVRHGTSAKDAFNILNALGIVAFAFRGHNLILEIQATMPSSEKHPSHVPMWKGVKASYALIAACLFPLSIGGYWAYGQMIPSGGMLTALYMFHSHDVSRFVLGLTSLFVVINGLCSFQIYGMPVFDDMESNYVKMKKQPCPWWLRVIFRIFFGFICFFIAVAIPFLSSLAGLIGGISLPVTLAYPSFMWLKFKKPKKFGPSWCINWFLGILGMCLSALLVAASIYVIVDTGVNVSFFNPK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00343 548 PANTHER OS05G0424000 PROTEIN-RELATED 32 543 - -
Aip05g00343 548 MobiDBLite consensus disorder prediction 1 30 - -
Aip05g00343 548 MobiDBLite consensus disorder prediction 59 85 - -
Aip05g00343 548 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 8 32 543 - -
Aip05g00343 548 Pfam Transmembrane amino acid transporter protein 127 535 IPR013057 -
Aip05g00343 548 MobiDBLite consensus disorder prediction 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00343 Aip-Chr5 3813410 3816802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00343 63 547 Organic Solute Cotransporters AT1G47670 54.291 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00343 - - adu:107487431 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00343 05 3813410 3816802 Aip05g00343 05 3813410 3816802 ECH