Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00340 ATGGCAAGCAAGTTGCATGTTCGGTCAAACAGTTTGCCAAATGGATCTCATCCATGCTCCTCCAGAGTAAGAGATCAATTGAAGAACCTCAAGGCTTTCGAAGCAACTTCGTCATCTGAGTCAATTGTCACTAGCTTGTCCCTTTTGGAAGATCTATACTCTTCTTTGGATGATCTTCTCAATGTTGCATCAACCCAAAAGGTCATCTCTCAACAACAAGGTGACAAATGCATTGAAGAAATCTTGGATGGATCCATGAAGGTCTTGGATATATGTGGCATCACAAGGGACACAGTTATGCAGATCAAGGAGAATGTGCAATTCCTTCATTCAGCTCTTAGAAGGAGAAAGGATGATTCAACCATCGAAACAAGCATAGCTGAATACAATTCCTTCTCAAAGAAGATGAAGAAAAATGTCAACAAGGTGATCACATCCTTGAAGCAGCTACAAAGCAAATTCGGAGCATCTCAACTGTTGAATGAAGAAGTGATGAGAGTTTTAAGAGAAGTGATTGCAATGAACGTGTCTATCTTCCAATCCCTTTTGACTTTTTTCGCTCGTCCAGCGTCGAAGTCAAAGGCAGCCAAATGGATGAACAAGTTGATGCATAAAGGAGTGGTTGCATCTGAAGATAACTCAGAGAATTGCAATGAATTGCAATTGGTGGATGCAACTTTGAACATCCTTTTAAAAGAAGGTGCTAATGGTTCCAACATGAAAGTAGGACATGAGAAATTGGAGGCTTTGGAGATTGCAATTGAAAGCATTGAGATTAGATTAGAAAGCTTATTTAGGAGCATGATTAAGACTAAGACATCCCTTTTGAACATATTATCCCAATAG 846 0.396 MASKLHVRSNSLPNGSHPCSSRVRDQLKNLKAFEATSSSESIVTSLSLLEDLYSSLDDLLNVASTQKVISQQQGDKCIEEILDGSMKVLDICGITRDTVMQIKENVQFLHSALRRRKDDSTIETSIAEYNSFSKKMKKNVNKVITSLKQLQSKFGASQLLNEEVMRVLREVIAMNVSIFQSLLTFFARPASKSKAAKWMNKLMHKGVVASEDNSENCNELQLVDATLNILLKEGANGSNMKVGHEKLEALEIAIESIEIRLESLFRSMIKTKTSLLNILSQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00340 281 Coils Coil 247 267 - -
Aip05g00340 281 Pfam Protein BPS1 46 278 IPR004320 GO:0048364|GO:0048367
Aip05g00340 281 PANTHER - 1 281 - -
Aip05g00340 281 PANTHER BPS1-LIKE PROTEIN 1 281 - -
Aip05g00340 281 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00340 Aip-Chr5 3794650 3795495 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00340 - - adu:107487427 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00340 05 3794650 3795495 Aip05g00340 05 3794650 3795495 ECH