Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00336 ATGGAAACCAAATTTCATATTCGGTCAAACAGTTTGCCAAATGGATCTCATCCAAGCTACACAAAGGTTCAAGAGGATCTCAACAAGCTCAGGACTTATGAAGCAACATCTGCTTCAACATCTGAGTCAATTAGCACTGGATTGTCCTTGCTTCAAGACTTATATGTTTCCTTGGATGATCTTCTCAATGCTGCTTCAACTCAAAAGGTTATCTCCCATCATCAAGGTGACAAATGGTTTGAAGAGATCTTGGATGGCTCAATCAAAGTCTTGGATATATGTGGAATCACAAGGGACACAGTTATGCAGATCAAGGAAAATGTACAATCCCTTCATTCTGCTCTCAGAAGGAGAAAGGCAGATTCAACTATTGGATCAAGAGTAGCCGAATACAATTTGTTGACAAAGGAGATTAAGAAGAATGTCAAGAAGTTGATCACATCTTTGAAGCAGAGCCAATTTGGAGCATCCCCATTGTTGAATGAAGATCAAGATGTTGCTAATGTGATTAGTGTTTTAAGAGAAGTCATTGAAATGAACATGTCTGTCTTCCAATCCCTACTTTCATTCTTGGCTGGTCCTCTTTCAAAGTCAAAGGCAGCTAAATGGATGAACAAATTGATGCATAAGGAAGAAGTGAACTCACAAAATTCCAATGAGTTGCAGTGTGTTGATGCTGCTTTAAGAACCATTCTAAATGAAGGTTCCAACATGAAGATAGCACATGAAAGATTGGCGGCTTTGGAGAATGTCATCACAAGCCTTGAGAATGATTTGGAGAACCTATTTAGGCATTTGATCAAAACAAGAGTCTCTCTTTTGAACATCATGGCTCAATAG 840 0.3881 METKFHIRSNSLPNGSHPSYTKVQEDLNKLRTYEATSASTSESISTGLSLLQDLYVSLDDLLNAASTQKVISHHQGDKWFEEILDGSIKVLDICGITRDTVMQIKENVQSLHSALRRRKADSTIGSRVAEYNLLTKEIKKNVKKLITSLKQSQFGASPLLNEDQDVANVISVLREVIEMNMSVFQSLLSFLAGPLSKSKAAKWMNKLMHKEEVNSQNSNELQCVDAALRTILNEGSNMKIAHERLAALENVITSLENDLENLFRHLIKTRVSLLNIMAQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00336 279 Pfam Protein BPS1 47 276 IPR004320 GO:0048364|GO:0048367
Aip05g00336 279 Coils Coil 238 265 - -
Aip05g00336 279 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF241)-RELATED 1 277 - -
Aip05g00336 279 MobiDBLite consensus disorder prediction 1 21 - -
Aip05g00336 279 PANTHER OS06G0725500 PROTEIN 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00336 Aip-Chr5 3787651 3788639 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00336 - - gmx:100776158 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00336 05 3787651 3788639 Aip05g00336 05 3787651 3788639 ECH