Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00330 ATGAAAGAATTAGAGATACTTATTCCGTGCTCAGCAAACTACACTGCGTTGACACCAATCAGTTTTCTAGAACAAGCAGCCACTATCTACGGTGATAACAAGGCCTCAATCATTTATGGTGACCATGTTAGATTTTCTTGGAAACAAACCTATCAAAGATGTCTCAACCTAGCTTCTTCTCTCCTCAGCTTTGGGATTTCCCATCCTCATCATATTGTTGTAGCTTTGGCGCCAAATGTTCCAGCACTCTATGAGCTACATTTTGGTGTTGCTATGGCAGGTGCTGTTCTTTCTGCACTCAACACCAAGTTATTGGATGTAACAACATTACCCCAAATTTTCGATCTATTGGAAACCTGCAAAATCATATTTGTGGACTATCAGTTCTTTGATTCTGCCCTCCAGGTGTTTGAAATTATCTCCCAAAGAAAATGCAAGCCACCACCCCTCATTGTCCTAATCTCTGATGACTATGATCAAATTCCATATTCCCCAGTGATGAATAATGTGAGTATCCTACCAAATACCTTAAGTTACAATGATCTTGTTGCTAAAGGGCACGCGGATTTTGAGACTTTTAGGCCAAGCAATGAATGCAATCCTATATCAGTGAGTTACACATCAGGCTCCACAGGGACTCCAAAAGGAGTTGTTTATAGCCATAGAGGTGCCTACCTTAATTCAATTGCGGCGATTTCTCGTTTCAACTTGAAATCAAGTTCAGTGTTACTATGGACAGTTGATATGTTTCGCTGCAACGGTTGGTGCCTTGCTTGGGCAATGTGTGCTGTTGGTGGCACCAATGTTTGCCTCAGAAATGTCTCAGCAAAAGGAATATTTGATGCCATCCAATTTCACAAAGTGACTCATTTGTGTGGTGCACCAACCCTTTTGAGCATCATTGCTAATTCATCCCCCAATGATCACAAACCTCTTCAATTCAGGGTAAAATTCATAGTTGCAGGTGTGCTACCACCAGTTCAAATCCTCAACAAGGTAGCAGAACTTGGATTTGATGTTAACATCGGATATGGAATGACAGAGACTCTGGGCCCTGTCATTGTAAGACCGTGGAAACCCGATTCGGATAATGAAGATACAAAGCTGAATTATGGTGAAGAAGGGCTTCCAAGCTTCATGATGGAAGTAGAGGTTGATGTGAAGGATCCAAACACCAGGAAAAGTATCCCTCATGATGGAAAAACCATTGGTGAAATCATGTTCAAAGGGAACACCCTAATGCTAGGGTACCTTAACTCGCAAGAAACCGAGGAAGCTCTTAAGAGTGGATGGTTCAAAACTGGGGATCTTGCTATTAGGCAAGAAAATGGTTCCATAACATTGAAAGATAGAGCAAAAGATATTATATATTCAAATGGAGAAGCTGTGAGTTCATTAGAGGTAGAAGCAGTGTTGTTGAGTCATCCAAAGGTTTTGGAAGCTGCTGTTGTTGGAAAATATGATGAGTGCTTGTTGGATTCATCACCATGTGCAGTTGTGAAATTGAAAGATGGATGCAGTGCCACTGTTGAAGAAATCATCAAGTTTTGTGAGGGTAAGCTGGCCACTAAAATGGTTCCTAAGAGTGTGGTGTTTGGGGATCTGCCTCTTAACTCAACTGGGAAGGTACAGAAGTTTCTTATAAGAGAGAAGATCAAGAGCAATGGATTGTGA 1674 0.4134 MKELEILIPCSANYTALTPISFLEQAATIYGDNKASIIYGDHVRFSWKQTYQRCLNLASSLLSFGISHPHHIVVALAPNVPALYELHFGVAMAGAVLSALNTKLLDVTTLPQIFDLLETCKIIFVDYQFFDSALQVFEIISQRKCKPPPLIVLISDDYDQIPYSPVMNNVSILPNTLSYNDLVAKGHADFETFRPSNECNPISVSYTSGSTGTPKGVVYSHRGAYLNSIAAISRFNLKSSSVLLWTVDMFRCNGWCLAWAMCAVGGTNVCLRNVSAKGIFDAIQFHKVTHLCGAPTLLSIIANSSPNDHKPLQFRVKFIVAGVLPPVQILNKVAELGFDVNIGYGMTETLGPVIVRPWKPDSDNEDTKLNYGEEGLPSFMMEVEVDVKDPNTRKSIPHDGKTIGEIMFKGNTLMLGYLNSQETEEALKSGWFKTGDLAIRQENGSITLKDRAKDIIYSNGEAVSSLEVEAVLLSHPKVLEAAVVGKYDECLLDSSPCAVVKLKDGCSATVEEIIKFCEGKLATKMVPKSVVFGDLPLNSTGKVQKFLIREKIKSNGL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00330 557 Pfam AMP-binding enzyme 25 456 IPR000873 -
Aip05g00330 557 PANTHER ACYL-ACTIVATING ENZYME 26 554 - -
Aip05g00330 557 Pfam AMP-binding enzyme C-terminal domain 467 542 IPR025110 -
Aip05g00330 557 Gene3D - 453 555 IPR045851 -
Aip05g00330 557 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 26 554 - -
Aip05g00330 557 Gene3D - 6 452 IPR042099 -
Aip05g00330 557 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Aip05g00330 557 SUPERFAMILY Acetyl-CoA synthetase-like 13 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00330 Aip-Chr5 3706328 3711794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00330 83 554 Miscellaneous Gene Families AT1G20560 48.319 9.83e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00330 - - lang:109330780 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00330 05 3706328 3711794 Aip05g00330 05 3706328 3711794 ECH
Aip05g00330 05 3706328 3711794 Aip10g00091 10 849245 853606 PCT